RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TIPINQ9BVW5 301 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 SLC12A4Q9UP95 1085 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 MAPK13O15264 365 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 DSG3P32926 999 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 NCALDP61601 193 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 GCNT1Q02742 428 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 STAT4Q14765 748 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 DDX27Q96GQ7 796 aaKnown RBP17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 RMDN2Q96LZ7 410 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 FHDC1Q9C0D6 1143 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 RPAP3Q9H6T3 665 aaPredicted RBP17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 PXMP2Q9NR77 195 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 BLOC1S6Q9UL45 172 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 DNPEPQ9ULA0 475 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 COQ4Q9Y3A0 265 aa17.44■□□□□ 0.38
CDC42EP4-201ENST00000335793 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 TAF1LQ8IZX4 1826 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 FAM47DPA6NHR8 397 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 RPL7AP62424 266 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 RBBP8NLQ8NC74 664 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 MCPH1Q8NEM0 835 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 LRRC8CQ8TDW0 803 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 ATG4CQ96DT6 458 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 MFSD14AQ96MC6 490 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 MSTO1Q9BUK6 570 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 PRDM16Q9HAZ2 1276 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZNF862O60290 1169 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 UNGP13051 313 aaPredicted RBP17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 NOP14P78316 857 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 NFX1Q12986 1120 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 CCNG2Q16589 344 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZBTB33Q86T24 672 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 TRIM42Q8IWZ5 723 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZNF516Q92618 1163 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 LNPEPQ9UIQ6 1025 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 TELO2Q9Y4R8 837 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 ATAD5Q96QE3 1844 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 KRT16P08779 473 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 PRKCEQ02156 737 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 TCEAL1Q15170 157 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 SCARA5Q6ZMJ2 495 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 DPH6Q7L8W6 267 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 SPOCK2Q92563 424 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 ERP27Q96DN0 273 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 TRABDQ9H4I3 376 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
CDC42EP4-201ENST00000335793 H0Y3Z8 333 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 DGAT1O75907 488 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 PSAPP07602 524 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 CD19P15391 556 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 CCND2P30279 289 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 RFC5P40937 340 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 CENPCQ03188 943 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 NIPA1Q7RTP0 329 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 MCEEQ96PE7 176 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 ST6GALNAC4Q9H4F1 302 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 C10orf88Q9H8K7 445 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 SLCO1B3Q9NPD5 702 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 PCMTD2Q9NV79 361 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 USH1CQ9Y6N9 552 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 MYPNQ86TC9 1320 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 FOCADQ5VW36 1801 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 GOLGA8RI6L899 631 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 LYPLA2O95372 231 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 IVDP26440 423 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 ALDH3A1P30838 453 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 PSMC4P43686 418 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 PDIA2Q13087 525 aaKnown RBP17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 TDRD10Q5VZ19 366 aaKnown RBP17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 SNRNP48Q6IEG0 339 aaKnown RBP17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 DNAJC24Q6P3W2 148 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 GLIS1Q8NBF1 620 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 NAF1Q96HR8 494 aaKnown RBP17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 PLEKHG4BQ96PX9 1271 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 CCDC134Q9H6E4 229 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 RIPK3Q9Y572 518 aa17.42■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZSCAN9O15535 394 aaPredicted RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 DKC1O60832 514 aaKnown RBP eCLIP17.41■□□□□ 0.383e-10■■■■■ 40
CDC42EP4-201ENST00000335793 MAMLD1Q13495 774 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 CUL2Q13617 745 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 TMEM154Q6P9G4 183 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 MFSD7Q6UXD7 560 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SYT15Q9BQS2 421 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SYNCQ9H7C4 482 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 ZWILCHQ9H900 591 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 TJP3O95049 919 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 LMNB2Q03252 620 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 FASTKD3Q14CZ7 662 aaKnown RBP17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SYCP2LQ5T4T6 812 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 RHBDF2Q6PJF5 856 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 FEZF2Q8TBJ5 459 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 MAGEB18Q96M61 343 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 TMEM121Q9BTD3 319 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 SLC38A10Q9HBR0 1119 aa17.41■□□□□ 0.38
CDC42EP4-201ENST00000335793 JPH1Q9HDC5 661 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms