RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 MAGEA13PA6NCF6 341 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 NCK2O43639 380 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 LCP1P13796 627 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 MRPS25P82663 173 aaKnown RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 DCAF4L1Q3SXM0 396 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 ANKRD40Q6AI12 368 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 USP17L6PQ6QN14 398 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 MB21D2Q8IYB1 491 aaPredicted RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 TADA2AO75478 443 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 GEMIN4P57678 1058 aaKnown RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 VSNL1P62760 191 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SV2CQ496J9 727 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 WHRNQ9P202 907 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 TCF3P15923 654 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 PCSK1P29120 753 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SFSWAPQ12872 951 aaKnown RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 ST13P5Q8NFI4 369 aaPredicted RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SH3GL1Q99961 368 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 TRIM9Q9C026 710 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 INO80Q9ULG1 1556 aaPredicted RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 TBX3O15119 743 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 GPSM2P81274 684 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 ARHGEF7Q14155 803 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 LRRC8DQ7L1W4 858 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SCFD2Q8WU76 684 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 TASP1Q9H6P5 420 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 KCNK10P57789 538 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 TRIM71Q2Q1W2 868 aaKnown RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 COL23A1Q86Y22 540 aaPredicted RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 OR6J1Q8NGC5 347 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 FCGR1AP12314 374 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SERPINB3P29508 390 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 MAPRE1Q15691 268 aaKnown RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 C6orf10Q5SRN2 563 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 ZNF746Q6NUN9 644 aaPredicted RBP12.29□□□□□ -0.44
SCN5A-202ENST00000333535 CCDC103Q8IW40 242 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 HPS3Q969F9 1004 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 CLMNQ96JQ2 1002 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SH3GL2Q99962 352 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 ADAM30Q9UKF2 790 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 DLC1Q96QB1 1528 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 MBD5Q9P267 1494 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SULT1E1P49888 294 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 CORO7P57737 925 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 NAT9Q9BTE0 207 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 SIK2Q9H0K1 926 aa12.29□□□□□ -0.44
SCN5A-202ENST00000333535 CFAP99D6REC4 459 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-202ENST00000333535 EPHA7Q15375 998 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 GPR141Q7Z602 305 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 PPIL6Q8IXY8 311 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 DDHD1Q8NEL9 900 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 MAP3K14Q99558 947 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 HSPBP1Q9NZL4 362 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 TMEM120BA0PK00 339 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 FDFT1P37268 417 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 FNTAP49354 379 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 SLC44A4Q53GD3 710 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 TTC33Q6PID6 262 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-202ENST00000333535 TBC1D10CQ8IV04 446 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 P3H2Q8IVL5 708 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 VPS50Q96JG6 964 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 SPON2Q9BUD6 331 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
SCN5A-202ENST00000333535 CYTH3O43739 400 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 RFC5P40937 340 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 DPYDQ12882 1025 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 TRIM16LQ309B1 348 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 XRRA1Q6P2D8 792 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 SHC4Q6S5L8 630 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 ERP27Q96DN0 273 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 MAGEB18Q96M61 343 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 XPO6Q96QU8 1125 aaKnown RBP12.28□□□□□ -0.44
SCN5A-202ENST00000333535 TMEM8AQ9HCN3 771 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 PCDHB2Q9Y5E7 798 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 C19orf81C9J6K1 198 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 NCF4Q15080 339 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 AGAP9Q5VTM2 703 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 RFX8Q6ZV50 586 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 GLYCTKQ8IVS8 523 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 PRG3Q9Y2Y8 225 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-202ENST00000333535 RPLP2P05387 115 aaKnown RBP12.28□□□□□ -0.44
SCN5A-202ENST00000333535 PRRG3Q9BZD7 231 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 RPAP3Q9H6T3 665 aaPredicted RBP12.28□□□□□ -0.44
SCN5A-202ENST00000333535 PKP3Q9Y446 797 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 NFIBO00712 420 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 NCOA4Q13772 614 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 IYDQ6PHW0 289 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 ATXN7L3BQ96GX2 97 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 ELMO2Q96JJ3 720 aa12.28□□□□□ -0.44
SCN5A-202ENST00000333535 USE1Q9NZ43 259 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms