RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 SEMA4AQ9H3S1 761 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 WHRNQ9P202 907 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 ASIC3Q9UHC3 531 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 NOVA2Q9UNW9 492 aaKnown RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 R3HDM2Q9Y2K5 976 aaKnown RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 MAGEB2O15479 319 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 ZNF286BP0CG31 522 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 SLMAPQ14BN4 828 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 AMHR2Q16671 573 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 SKIDA1Q1XH10 827 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 SYDE1Q6ZW31 735 aaPredicted RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 HOOK3Q86VS8 718 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 WDTC1Q8N5D0 677 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 MCEEQ96PE7 176 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 SIX4Q9UIU6 781 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 AKT3Q9Y243 479 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 CEP83Q9Y592 693 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 ANKRD65E5RJM6 399 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 STAG3L1P0CL83 205 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 ADCYAP1R1P41586 468 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 LACTBP83111 547 aaPredicted RBP18.43■□□□□ 0.54
DDX28-201ENST00000332395 ZNF252P-AS1Q0IIN9 211 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 PTK6Q13882 451 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 SLC29A2Q14542 456 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 ODF2Q5BJF6 829 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 SMYD5Q6GMV2 418 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 IFNLR1Q8IU57 520 aaPredicted RBP18.43■□□□□ 0.54
DDX28-201ENST00000332395 C1orf127Q8N9H9 656 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 HOMER3Q9NSC5 361 aa18.43■□□□□ 0.54
DDX28-201ENST00000332395 A0A087WUV0 522 aaPredicted RBP18.42■□□□□ 0.54
DDX28-201ENST00000332395 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
DDX28-201ENST00000332395 LACTBL1A8MY62 500 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 DCDC2CA8MYV0 355 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 TP73O15350 636 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 GAS8O95995 478 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 MCF2P10911 925 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 RARGP13631 454 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 FGFR4P22455 802 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 TMOD1P28289 359 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 RAP1GAPP47736 663 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 WDR72Q3MJ13 1102 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 ZNF667Q5HYK9 610 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 DCUN1D2Q6PH85 259 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 ANKS1BQ7Z6G8 1248 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 ERICH1Q86X53 443 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 ATL2Q8NHH9 583 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
DDX28-201ENST00000332395 CCDC114Q96M63 670 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 BCO2Q9BYV7 579 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 ZNF408Q9H9D4 720 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.42■□□□□ 0.54
DDX28-201ENST00000332395 SLC12A6Q9UHW9 1150 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 GLTPD2A6NH11 291 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 MEFVO15553 781 aaPredicted RBP18.42■□□□□ 0.54
DDX28-201ENST00000332395 VTNP04004 478 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 TCF4P15884 667 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 CCT5P48643 541 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 MAGOHP61326 146 aaKnown RBP18.42■□□□□ 0.54
DDX28-201ENST00000332395 TNFAIP2Q03169 654 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 CCNG2Q16589 344 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 PPP1R15BQ5SWA1 713 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 JADE1Q6IE81 842 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 TADA2BQ86TJ2 420 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 SNF8Q96H20 258 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 CPB2Q96IY4 423 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 MS4A4AQ96JQ5 239 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 KATNBL1Q9H079 304 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 FAM107BQ9H098 131 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 PDZD7Q9H5P4 517 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 KLHL11Q9NVR0 708 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 COL1A2P08123 1366 aa18.42■□□□□ 0.54
DDX28-201ENST00000332395 BTBD19C9JJ37 291 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 CAND2O75155 1236 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 CETPP11597 493 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 CD19P15391 556 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 ITIH2P19823 946 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 PPP2R2AP63151 447 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 OGDHQ02218 1023 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 TAP1Q03518 808 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 NFX1Q12986 1120 aaKnown RBP18.41■□□□□ 0.54
DDX28-201ENST00000332395 ATP13A4Q4VNC1 1196 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 UBAP2Q5T6F2 1119 aaKnown RBP18.41■□□□□ 0.54
DDX28-201ENST00000332395 CYP4A22Q5TCH4 519 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 TMEM130Q8N3G9 435 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 C3orf20Q8ND61 904 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 C16orf70Q9BSU1 422 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 IVNS1ABPQ9Y6Y0 642 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 F8VP50 259 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 RIPK2O43353 540 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 ITGB3P05106 788 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 IVDP26440 423 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 CDH8P55286 799 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 MKRN3Q13064 507 aaKnown RBP18.41■□□□□ 0.54
DDX28-201ENST00000332395 TRIP13Q15645 432 aaPredicted RBP18.41■□□□□ 0.54
DDX28-201ENST00000332395 DENND1BQ6P3S1 775 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 ZNF467Q7Z7K2 595 aaPredicted RBP18.41■□□□□ 0.54
DDX28-201ENST00000332395 CCDC25Q86WR0 208 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 TLCD1Q96CP7 247 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 FAM118BQ9BPY3 351 aa18.41■□□□□ 0.54
DDX28-201ENST00000332395 EPN3Q9H201 632 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms