RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 RBAKQ9NYW8 714 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 E7ENQ6 273 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 KPNA4O00629 521 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 KLRC1P26715 233 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 CACNB3P54284 484 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 AQP5P55064 265 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 TPI1P60174 286 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 GALNTL6Q49A17 601 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 MTA3Q9BTC8 594 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 NDUFA13Q9P0J0 144 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 GRID1Q9ULK0 1009 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 CDY2AQ9Y6F7 541 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 CDY1Q9Y6F8 540 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 RECQLP46063 649 aaPredicted RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 SERPINB9P50453 376 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 TRAF2Q12933 501 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 RASA2Q15283 850 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 VN1R5Q7Z5H4 357 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 SUGP1Q8IWZ8 645 aaKnown RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 LRRC71Q8N4P6 559 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 SLC44A5Q8NCS7 719 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 AP5M1Q9H0R1 490 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 KLHL20Q9Y2M5 609 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 A8MXQ7 604 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 CSE1LP55060 971 aaKnown RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 ZNF235Q14590 738 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 DCAF15Q66K64 600 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 BNC2Q6ZN30 1099 aaPredicted RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 GUF1Q8N442 669 aaKnown RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 GRIP2Q9C0E4 1043 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 DMAP1Q9NPF5 467 aaPredicted RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 SELENONQ9NZV5 590 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 PSTPIP1O43586 416 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 ATP4AP20648 1035 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 FRMD5Q7Z6J6 570 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 ZCCHC7Q8N3Z6 543 aaKnown RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 SCFD1Q8WVM8 642 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 ATG4AQ8WYN0 398 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 CAPN10Q9HC96 672 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 STAP1Q9ULZ2 295 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 BGNP21810 368 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 DPYDQ12882 1025 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 KRR1Q13601 381 aaKnown RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 MAPK6Q16659 721 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 ADCK2Q7Z695 626 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 C15orf41Q9Y2V0 281 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 LSM1O15116 133 aaKnown RBP17.15■□□□□ 0.34
SMAD3-201ENST00000327367 RALBP11234 206 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 HSPA2P54652 639 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 ALFQ53S48 1182 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 MPP6Q9NZW5 540 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 GTF2A1LQ9UNN4 478 aa17.15■□□□□ 0.34
SMAD3-201ENST00000327367 ITGB3BPQ13352 177 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 GPD1LQ8N335 351 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ZFP42Q96MM3 310 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 TRAPPC9Q96Q05 1148 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 DHX36Q9H2U1 1008 aaKnown RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 PRDM4Q9UKN5 801 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 NCF1BA6NI72 391 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 NCF1CA8MVU1 366 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 NCF1P14598 390 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 UCHL3P15374 230 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 H2AFXP16104 143 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 IL5RAQ01344 420 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ZNF57Q68EA5 555 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 SWSAP1Q6NVH7 229 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 PRUNE1Q86TP1 453 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 CENPLQ8N0S6 344 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 RBBP8NLQ8NC74 664 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 HNRNPLLQ8WVV9 542 aaKnown RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 RGL1Q9NZL6 768 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ZBTB49Q6ZSB9 765 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 THEM5Q8N1Q8 247 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ANKRD49Q8WVL7 239 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 LXNQ9BS40 222 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 PLEKHA5Q9HAU0 1116 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 MROH7-TTC4A0A0A0MT08 1334 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ARHGEF12Q9NZN5 1544 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 TSPAN9O75954 239 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 Q4G0T1 1027 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 SERPINB12Q96P63 405 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 SEMA6AQ9H2E6 1030 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 RPAP3Q9H6T3 665 aaPredicted RBP17.14■□□□□ 0.33
SMAD3-201ENST00000327367 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 SNAP23O00161 211 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 PEX1O43933 1283 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 EPHB2P29323 1055 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 GLRBP48167 497 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 ADRM1Q16186 407 aa17.14■□□□□ 0.33
SMAD3-201ENST00000327367 KBTBD2Q8IY47 623 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms