RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 CXCL8P10145 99 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 NFX1Q12986 1120 aaKnown RBP21.84■■□□□ 1.09
TTC39C-202ENST00000317571 ZNF699Q32M78 642 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 C6orf89Q6UWU4 347 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 SLITRK1Q96PX8 696 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 XPO6Q96QU8 1125 aaKnown RBP21.84■■□□□ 1.09
TTC39C-202ENST00000317571 INO80BQ9C086 356 aaPredicted RBP21.84■■□□□ 1.09
TTC39C-202ENST00000317571 CDT1Q9H211 546 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 IP6K2Q9UHH9 426 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 DDX20Q9UHI6 824 aaKnown RBP21.84■■□□□ 1.09
TTC39C-202ENST00000317571 SIX4Q9UIU6 781 aa21.84■■□□□ 1.09
TTC39C-202ENST00000317571 FOXO6A8MYZ6 492 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 RASGRF2O14827 1237 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 C6orf118Q5T5N4 469 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 DENND1BQ6P3S1 775 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 SYDE1Q6ZW31 735 aaPredicted RBP21.83■■□□□ 1.09
TTC39C-202ENST00000317571 TRMT10CQ7L0Y3 403 aaKnown RBP21.83■■□□□ 1.09
TTC39C-202ENST00000317571 CCDC125Q86Z20 511 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 ANKRD13AQ8IZ07 590 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 CDCA5Q96FF9 252 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 SELENOSQ9BQE4 189 aa21.83■■□□□ 1.09
TTC39C-202ENST00000317571 CNOT10Q9H9A5 744 aaKnown RBP21.83■■□□□ 1.09
TTC39C-202ENST00000317571 C5orf60A6NFR6 353 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 GAS2O43903 313 aaKnown RBP21.82■■□□□ 1.08
TTC39C-202ENST00000317571 GAS8O95995 478 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 AGTP01019 485 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 ATF2P15336 505 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 KLRC2P26717 231 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 CDH5P33151 784 aaPredicted RBP21.82■■□□□ 1.08
TTC39C-202ENST00000317571 ORC1Q13415 861 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 EFCAB12Q6NXP0 572 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 GRK7Q8WTQ7 553 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 KAT2BQ92831 832 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 JPH2Q9BR39 696 aaPredicted RBP21.82■■□□□ 1.08
TTC39C-202ENST00000317571 SDCBP2Q9H190 292 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 CTNNAL1Q9UBT7 734 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 ATXN2Q99700 1313 aaKnown RBP21.82■■□□□ 1.08
TTC39C-202ENST00000317571 GPR25O00155 361 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 LSM8O95777 96 aaKnown RBP21.82■■□□□ 1.08
TTC39C-202ENST00000317571 TXNP10599 105 aaKnown RBP21.82■■□□□ 1.08
TTC39C-202ENST00000317571 ADCY8P40145 1251 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 TRPC3Q13507 836 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 KCTD2Q14681 263 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 KYNUQ16719 465 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 WDR78Q5VTH9 848 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 KAZNQ674X7 775 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 FHDC1Q9C0D6 1143 aaPredicted RBP21.82■■□□□ 1.08
TTC39C-202ENST00000317571 C2orf40Q9H1Z8 148 aa21.82■■□□□ 1.08
TTC39C-202ENST00000317571 B4GALT4O60513 344 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 C22orf31O95567 290 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 CALB1P05937 261 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 NFICP08651 508 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 CREB1P16220 341 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 DRD4P21917 467 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 GJA5P36382 358 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 CDH8P55286 799 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 PTPN20Q4JDL3 420 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 MFSD5Q6N075 450 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 DNAJC24Q6P3W2 148 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 OPTNQ96CV9 577 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 SCLT1Q96NL6 688 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 PPP1R16BQ96T49 567 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 IFT122Q9HBG6 1241 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 NXF1Q9UBU9 619 aaKnown RBP21.81■■□□□ 1.08
TTC39C-202ENST00000317571 DNPEPQ9ULA0 475 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 PCDHGC3Q9UN70 934 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 KCNV1Q6PIU1 500 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 EXOC3L1Q86VI1 746 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 TMEM35BQ8NCS4 154 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 ZNF317Q96PQ6 595 aaPredicted RBP21.81■■□□□ 1.08
TTC39C-202ENST00000317571 TRAIPQ9BWF2 469 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 NINJ2Q9NZG7 142 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 HMGXB4Q9UGU5 601 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 ANAPC5Q9UJX4 755 aa21.81■■□□□ 1.08
TTC39C-202ENST00000317571 KRT1P04264 644 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 PSMC4P43686 418 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 PPIL2Q13356 520 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 CENPTQ96BT3 561 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 TWNKQ96RR1 684 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 RNF181Q9P0P0 153 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 LIASO43766 372 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 TTC4O95801 387 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 ZSCAN5DPP0CG00 497 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 CETPP11597 493 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 ETS1P14921 441 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 IGBP1P78318 339 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 SPRED3Q2MJR0 410 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 PPP1R2P3Q6NXS1 205 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 ARFGAP1Q8N6T3 406 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 C1orf127Q8N9H9 656 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 CXorf38Q8TB03 319 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 SMARCAD1Q9H4L7 1026 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 PCNTO95613 3336 aa21.8■■□□□ 1.08
TTC39C-202ENST00000317571 ATF7P17544 494 aaPredicted RBP21.79■■□□□ 1.08
TTC39C-202ENST00000317571 IFT88Q13099 833 aa21.79■■□□□ 1.08
TTC39C-202ENST00000317571 IZUMO3Q5VZ72 239 aa21.79■■□□□ 1.08
TTC39C-202ENST00000317571 JOSD2Q8TAC2 188 aa21.79■■□□□ 1.08
TTC39C-202ENST00000317571 ZSWIM8A7E2V4 1837 aa21.79■■□□□ 1.08
TTC39C-202ENST00000317571 EIF4BP23588 611 aaKnown RBP21.79■■□□□ 1.08
TTC39C-202ENST00000317571 ARHGAP1Q07960 439 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms