RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 POU5F1Q01860 360 aaKnown RBP12.95□□□□□ -0.34
SCFD1-201ENST00000311943 SLC5A9Q2M3M2 681 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 USP37Q86T82 979 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 PPFIBP1Q86W92 1011 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 GJD3Q8N144 294 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 APPL2Q8NEU8 664 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 ITFG1Q8TB96 612 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
SCFD1-201ENST00000311943 ING5Q8WYH8 240 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 MMS19Q96T76 1030 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 SFXN1Q9H9B4 322 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
SCFD1-201ENST00000311943 FRMD4BQ9Y2L6 1034 aa12.95□□□□□ -0.34
SCFD1-201ENST00000311943 MTMR11A4FU01 709 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 CYP11A1P05108 521 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 ATF2P15336 505 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 CCNE1P24864 410 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 SNRPFP62306 86 aaKnown RBP12.94□□□□□ -0.34
SCFD1-201ENST00000311943 SV2CQ496J9 727 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 DCAF17Q5H9S7 520 aaPredicted RBP12.94□□□□□ -0.34
SCFD1-201ENST00000311943 C15orf39Q6ZRI6 1047 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 NT5DC4Q86YG4 428 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 ELOA2Q8IYF1 753 aaPredicted RBP12.94□□□□□ -0.34
SCFD1-201ENST00000311943 GOLGA5Q8TBA6 731 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 TCEAL4Q96EI5 215 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 MUTYHQ9UIF7 546 aa12.94□□□□□ -0.34
SCFD1-201ENST00000311943 NCOR1O75376 2440 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PRRG1O14668 218 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PHACTR2O75167 634 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 CLSTN1O94985 981 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 HOXB8P17481 243 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 CACNA2D1P54289 1103 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 TWF1Q12792 350 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 NCOA4Q13772 614 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ZACNQ401N2 412 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PPM1LQ5SGD2 360 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ADHFE1Q8IWW8 467 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ADGRF2Q8IZF7 708 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 LRRC52Q8N7C0 313 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 MYADMQ96S97 322 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ARID3AQ99856 593 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 RPP25Q9BUL9 199 aaKnown RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PRKD2Q9BZL6 878 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 DNAJC25Q9H1X3 360 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 TMEM30AQ9NV96 361 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 CGNQ9P2M7 1197 aaKnown RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 MYO10Q9HD67 2058 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 HLA-DRAP01903 254 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 TYMPP19971 482 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 TCERG1LQ5VWI1 586 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 GIPC2Q8TF65 315 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 TMEM174Q8WUU8 243 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 TSPAN18Q96SJ8 248 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PKMYT1Q99640 499 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PHF7Q9BWX1 381 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ZCWPW1Q9H0M4 648 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 PIDD1Q9HB75 910 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 CRTAC1Q9NQ79 661 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 GDAP2Q9NXN4 497 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 ABI2Q9NYB9 513 aaPredicted RBP12.93□□□□□ -0.34
SCFD1-201ENST00000311943 STK39Q9UEW8 545 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 INSL5Q9Y5Q6 135 aa12.93□□□□□ -0.34
SCFD1-201ENST00000311943 H7C4K7 107 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 GABRDO14764 452 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 ATF6P18850 670 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 CYP2F1P24903 491 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 APBA1Q02410 837 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 ITIH3Q06033 890 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 GPR17Q13304 367 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 TRPC3Q13507 836 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 MTMR3Q13615 1198 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 NFIL3Q16649 462 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 STXBP5Q5T5C0 1151 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 LIN9Q5TKA1 542 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 RNF135Q8IUD6 432 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 CREBRFQ8IUR6 639 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 TATDN2Q93075 761 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 CCDC34Q96HJ3 373 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 ZNF560Q96MR9 790 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 GBP4Q96PP9 640 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 SEPT5Q99719 369 aaPredicted RBP12.92□□□□□ -0.34
SCFD1-201ENST00000311943 SRRTQ9BXP5 876 aaKnown RBP12.92□□□□□ -0.34
SCFD1-201ENST00000311943 PLEKHA4Q9H4M7 779 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 DZANK1Q9NVP4 752 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 LIMD1Q9UGP4 676 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 HOOK1Q9UJC3 728 aaKnown RBP12.92□□□□□ -0.34
SCFD1-201ENST00000311943 COL4A3Q01955 1670 aa12.92□□□□□ -0.34
SCFD1-201ENST00000311943 FAM86C2PA6NEL3 165 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms