RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FBXW11Q9UKB1 542 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 L1RE1Q9UN81 338 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 WDR27A2RRH5 827 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PRRG1O14668 218 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ADAM12O43184 909 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 LETM1O95202 739 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 VNN1O95497 513 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 C8AP07357 584 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SPATA31D3P0C874 917 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TRIM21P19474 475 aaKnown RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PCSK1P29120 753 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 LHX1P48742 406 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 NOP14P78316 857 aaKnown RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ITIH3Q06033 890 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PPP3CAQ08209 521 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CETN1Q12798 172 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SGSM1Q2NKQ1 1148 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SKOR2Q2VWA4 1001 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PPM1LQ5SGD2 360 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TPGS2Q68CL5 300 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 RSPO2Q6UXX9 243 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SPATA31D4Q6ZUB0 917 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DCP1BQ8IZD4 617 aaKnown RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SMRP1Q8NCR6 262 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 FBXL13Q8NEE6 735 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ZNF461Q8TAF7 563 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SLC7A14Q8TBB6 771 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 BORCS6Q96GS4 357 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CNOT6LQ96LI5 555 aaKnown RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 RIPOR3Q96MK2 946 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ASB2Q96Q27 587 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SNX25Q9H3E2 840 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 VRTNQ9H8Y1 702 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ZDHHC7Q9NXF8 308 aa11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 AFF4Q9UHB7 1163 aaKnown RBP11.79□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MBTPS2O43462 519 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 LRG1P02750 347 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MTIF2P46199 727 aaKnown RBP11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 KCNQ1P51787 676 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ADCY1Q08828 1119 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SMARCB1Q12824 385 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SOWAHAQ2M3V2 549 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 WDR44Q5JSH3 913 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 C1orf220Q5T0J3 134 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 LILRA6Q6PI73 481 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 C15orf39Q6ZRI6 1047 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 RTL10Q7L3V2 364 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TAS1R2Q8TE23 839 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SLC35C1Q96A29 364 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PGLYRP2Q96PD5 576 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 THAP9Q9H5L6 903 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PIDD1Q9HB75 910 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CYP4F11Q9HBI6 524 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MAFFQ9ULX9 164 aa11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.78□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CCDC195A0A1B0GUA6 201 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 XYLBO75191 536 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TACC1O75410 805 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ZMYND10O75800 440 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 HNRNPA1P09651 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 OR4Q2P0C623 313 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ATF2P15336 505 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 HOXA9P31269 272 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MTHFRP42898 656 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 FMO5P49326 533 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 MARSP56192 900 aaKnown RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TYRO3Q06418 890 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 GPR17Q13304 367 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PLD1Q13393 1074 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 UVSSAQ2YD98 709 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CBWD6Q4V339 395 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SLC39A12Q504Y0 691 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 INTS6LQ5JSJ4 861 aaKnown RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CBWD3Q5JTY5 395 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CBWD5Q5RIA9 395 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SCARA3Q6AZY7 606 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SYCE2Q6PIF2 218 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TMC5Q6UXY8 1006 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CYP26C1Q6V0L0 522 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 RNF19BQ6ZMZ0 732 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 TRIM59Q8IWR1 403 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ELMOD1Q8N336 334 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 C12orf76Q8N812 135 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 CMASQ8NFW8 434 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 OR6B3Q8NGW1 331 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 OR10T2Q8NGX3 314 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SPPL2BQ8TCT7 592 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 C2orf15Q8WU43 125 aaKnown RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SMG7Q92540 1137 aaKnown RBP11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 NECTIN4Q96NY8 510 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 SYT15Q9BQS2 421 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 ACBD6Q9BR61 282 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 PI4K2AQ9BTU6 479 aa11.77□□□□□ -0.53
CSPG4P1Y-201ENST00000306641 DNAI2Q9GZS0 605 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms