RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 PROSCO94903 275 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 AXLP30530 894 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 RBP5P82980 135 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 ZNF252P-AS1Q0IIN9 211 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 INCA1Q0VD86 236 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 LIN9Q5TKA1 542 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 NME8Q8N427 588 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 TMEM35BQ8NCS4 154 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 FEZF2Q8TBJ5 459 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 ZBTB9Q96C00 473 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 DDX27Q96GQ7 796 aaKnown RBP14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 UPF3AQ9H1J1 476 aaKnown RBP14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 SLITRK6Q9H5Y7 841 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 VIPAS39Q9H9C1 493 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 CYP3A43Q9HB55 503 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 CNTN3Q9P232 1028 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 TJP2Q9UDY2 1190 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 HPCAL4Q9UM19 191 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 NFU1Q9UMS0 254 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 DERAQ9Y315 318 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 NME7Q9Y5B8 376 aa14.44□□□□□ -0.1
CHMP4C-201ENST00000297265 TLR3O15455 904 aaKnown RBP14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 TTI1O43156 1089 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 PGK1P00558 417 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 AKAP5P24588 427 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 SLC1A1P43005 524 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 CRYBB1P53674 252 aaPredicted RBP14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 FCGRTP55899 365 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 RWDD2BP57060 319 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 TAS2R40P59535 323 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 YWHAEP62258 255 aaKnown RBP14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 PRKCZQ05513 592 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 PTPN20Q4JDL3 420 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 XKR4Q5GH76 650 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 GNASQ5JWF2 1037 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 PPP1R2P3Q6NXS1 205 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 C7orf31Q8N865 590 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 WNT8BQ93098 351 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 CAVIN3Q969G5 261 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 C18orf25Q96B23 403 aaPredicted RBP14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 TMEM176AQ96HP8 235 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 HERPUD2Q9BSE4 406 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 MRPL47Q9HD33 250 aaKnown RBP14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 PARVAQ9NVD7 372 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 TUBGCP4Q9UGJ1 667 aa14.43□□□□□ -0.1
CHMP4C-201ENST00000297265 AGPSO00116 658 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 RECQL4O94761 1208 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 EPHB4P54760 987 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 OGDHQ02218 1023 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 PTPN11Q06124 597 aaPredicted RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 CACNB2Q08289 660 aaPredicted RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 CXCL17Q6UXB2 119 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 DDX42Q86XP3 938 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 SLC13A5Q86YT5 568 aaPredicted RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 GTF2IRD1Q9UHL9 959 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 ADAMTS4O75173 837 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 CYP3A5P20815 502 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 PTGIRP43119 386 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 CYP1B1Q16678 543 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 NBPF20Q3BBV1 942 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 GLRA4Q5JXX5 417 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 TTC27Q6P3X3 843 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 EMBQ6PCB8 327 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 SND1Q7KZF4 910 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 ANKS1BQ7Z6G8 1248 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 TSEN2Q8NCE0 465 aaKnown RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 ARRDC4Q8NCT1 418 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 SMG8Q8ND04 991 aaKnown RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 IFT81Q8WYA0 676 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 NEUROG2Q9H2A3 272 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 BARX2Q9UMQ3 279 aaPredicted RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 PIN4Q9Y237 131 aaKnown RBP14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 SCINQ9Y6U3 715 aa14.42□□□□□ -0.1
CHMP4C-201ENST00000297265 FSCN2O14926 492 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 SEPT4O43236 478 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 KPNA6O60684 536 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 AOC2O75106 756 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 SYF2O95926 243 aaKnown RBP14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 CALB1P05937 261 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 RARAP10276 462 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 CD19P15391 556 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 TCF4P15884 667 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 GPD2P43304 727 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 AARSP49588 968 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 NDST1P52848 882 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 CLUL1Q15846 466 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 CYP4A22Q5TCH4 519 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 CCSAPQ6IQ19 270 aaPredicted RBP14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 GDF6Q6KF10 455 aaPredicted RBP14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 FAM228AQ86W67 206 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 EIF1ADQ8N9N8 165 aaKnown RBP14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 SMC1BQ8NDV3 1235 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 C18orf8Q96DM3 657 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 CPXM1Q96SM3 734 aa14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 MTG1Q9BT17 334 aaPredicted RBP14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHMP4C-201ENST00000297265 SMIM28A0A1B0GU29 152 aa14.4□□□□□ -0.1
CHMP4C-201ENST00000297265 GNAT1P11488 350 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms