RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 CTC1Q2NKJ3 1217 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 DPY19L2Q6NUT2 758 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 NCCRP1Q6ZVX7 275 aaPredicted RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 NANOGNBQ7Z5D8 188 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 DHDDSQ86SQ9 333 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 SLC47A2Q86VL8 602 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 TRIML2Q8N7C3 387 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 ACSF2Q96CM8 615 aaPredicted RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 CEP95Q96GE4 821 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 LZTS2Q9BRK4 669 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 DCUN1D5Q9BTE7 237 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 PSTPIP2Q9H939 334 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 LGALS13Q9UHV8 139 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 EMSYQ7Z589 1322 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 RARBP10826 455 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 UQCRBP14927 111 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 HSPA1LP34931 641 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 CAV1Q03135 178 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 ARHGEF19Q8IW93 802 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 SEPT12Q8IYM1 358 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 PTCD3Q96EY7 689 aaKnown RBP10.71□□□□□ -0.7
CLDN1-201ENST00000295522 MECRQ9BV79 373 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 FHDC1Q9C0D6 1143 aaPredicted RBP10.71□□□□□ -0.7
CLDN1-201ENST00000295522 LRRC19Q9H756 370 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 C10orf88Q9H8K7 445 aa10.71□□□□□ -0.7
CLDN1-201ENST00000295522 ZNF395Q9H8N7 513 aaPredicted RBP10.71□□□□□ -0.7
CLDN1-201ENST00000295522 ASTN1O14525 1302 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PDLIM1O00151 329 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 LSM1O15116 133 aaKnown RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 SORBS2O94875 1100 aaKnown RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 ALAS1P13196 640 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 RAG1P15918 1043 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 AQP5P55064 265 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 FOLH1Q04609 750 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 CATSPER3Q86XQ3 398 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 TREML1Q86YW5 311 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 HERPUD2Q9BSE4 406 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 DCLK3Q9C098 648 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 IFT122Q9HBG6 1241 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 KANSL3Q9P2N6 904 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 BARX2Q9UMQ3 279 aaPredicted RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 CASZ1Q86V15 1759 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 GOLGA8IPA6NC78 632 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 GOLGA8JA6NMD2 632 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 ZFXP17010 805 aaPredicted RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 MTTPP55157 894 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PICALMQ13492 652 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PEX6Q13608 980 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 FAM178BQ8IXR5 827 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 GLIS1Q8NBF1 620 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PCDHB18PQ96TA0 734 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 TLE6Q9H808 572 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PTTG2Q9NZH5 202 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PCDHA2Q9Y5H9 948 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 ACTL7BQ9Y614 415 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PKD1L3Q7Z443 1732 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 ARHGAP10A1A4S6 786 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PRR5-ARHGAP8B1AHC4 643 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 FOXD2O60548 495 aaPredicted RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 ZMPSTE24O75844 475 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 CDK4P11802 303 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 ARHGAP8P85298 464 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 PTK6Q13882 451 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 KRT81Q14533 505 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 SMAD1Q15797 465 aaKnown RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 EFHC1Q5JVL4 640 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 C3orf62Q6ZUJ4 267 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 KCTD1Q719H9 257 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 CENPUQ71F23 418 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 RHPN2Q8IUC4 686 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 BBOF1Q8ND07 529 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 RBMX2Q9Y388 322 aaKnown RBP10.7□□□□□ -0.7
CLDN1-201ENST00000295522 DTNAQ9Y4J8 743 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 GMEB1Q9Y692 573 aa10.7□□□□□ -0.7
CLDN1-201ENST00000295522 SLIT3O75094 1523 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 MUTP22033 750 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 CIITAP33076 1130 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 MAN1A1P33908 653 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 HOXD13P35453 343 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 RPL5P46777 297 aaKnown RBP10.69□□□□□ -0.7
CLDN1-201ENST00000295522 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 SNAP25P60880 206 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 PLOD1Q02809 727 aaPredicted RBP10.69□□□□□ -0.7
CLDN1-201ENST00000295522 RALGPS1Q5JS13 557 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 ODR4Q5SWX8 454 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 C12orf60Q5U649 245 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 KLHL35Q6PF15 583 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 PASD1Q8IV76 773 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 DENND1AQ8TEH3 1009 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 TEKT1Q969V4 418 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 FAM84BQ96KN1 310 aaPredicted RBP10.69□□□□□ -0.7
CLDN1-201ENST00000295522 PAFAH2Q99487 392 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 TCHPQ9BT92 498 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 SENP1Q9P0U3 644 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 RABGAP1Q9Y3P9 1069 aa10.69□□□□□ -0.7
CLDN1-201ENST00000295522 CYP19A1P11511 503 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms