RNA–Protein interactions for RNA: ENST00000295461.9

NIPAL1-201, Transcript of NIPA like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL1, Length 5,300 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1-201ENST00000295461 CHST13Q8NET6 341 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 CISHQ9NSE2 258 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 MYH7P12883 1935 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 ZC3H11AO75152 810 aaKnown RBP eCLIP12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 DSG3P32926 999 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 CTCFP49711 727 aaPredicted RBP12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 JAM2P57087 298 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 SPIRE1Q08AE8 756 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 C10orf88Q9H8K7 445 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 RNF181Q9P0P0 153 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 PSMC3IPQ9P2W1 217 aaPredicted RBP12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 DDX3YO15523 660 aaKnown RBP12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 PEX19P40855 299 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 CD302Q8IX05 232 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 ZNF606Q8WXB4 792 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 KREMEN1Q96MU8 473 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 A1CFQ9NQ94 594 aaKnown RBP12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 OGTO15294 1046 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 HAUS5O94927 633 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 RPS12P25398 132 aaKnown RBP12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 CA8P35219 290 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 ARFIP2P53365 341 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 TMEM132DQ14C87 1099 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 LVRNQ6Q4G3 990 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 ANO5Q75V66 913 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 TRIM42Q8IWZ5 723 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 TRAPPC12Q8WVT3 735 aa12.23□□□□□ -0.45
NIPAL1-201ENST00000295461 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 SLIT2O94813 1529 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 IGF2BP3O00425 579 aaKnown RBP eCLIP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 APOL1O14791 398 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 PLSCR1O15162 318 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 GYG2O15488 501 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 TTC4O95801 387 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 NME3Q13232 169 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 ATP13A4Q4VNC1 1196 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 HACE1Q8IYU2 909 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 SMARCAD1Q9H4L7 1026 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 NWD2Q9ULI1 1742 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 CFAP73A6NFT4 308 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 GCNT1Q02742 428 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 ASAP3Q8TDY4 903 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 UBN1Q9NPG3 1134 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 TCRBV7S2A1N4TA0A589 114 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 ZSCAN5DPP0CG00 497 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 OTUD4Q01804 1114 aaKnown RBP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 PSMD6Q15008 389 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 MDH1BQ5I0G3 518 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 CYB5D1Q6P9G0 228 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 SPOCD1Q6ZMY3 1216 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 BEST2Q8NFU1 509 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 TRAPPC3O43617 180 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 CCNE2O96020 404 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 MRPS9P82933 396 aaKnown RBP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 AP1B1Q10567 949 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 DUPD1Q68J44 220 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 HEATR6Q6AI08 1181 aaKnown RBP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 MFSD7Q6UXD7 560 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 VSIG10LQ86VR7 867 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 GPATCH2LQ9NWQ4 482 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 NAALADL1Q9UQQ1 740 aa12.22□□□□□ -0.45
NIPAL1-201ENST00000295461 C4AP0C0L4 1744 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 KRT38O76015 456 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 OVGP1Q12889 678 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 CCNG2Q16589 344 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 SIAH1Q8IUQ4 282 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 SMC1BQ8NDV3 1235 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 SHC3Q92529 594 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 ATXN7L3BQ96GX2 97 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 SGSM3Q96HU1 749 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 CYTH2Q99418 400 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 FIS1Q9Y3D6 152 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 PHLPP1O60346 1717 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 MYL3P08590 195 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 AMHR2Q16671 573 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 ATG16L1Q676U5 607 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 CRLF3Q8IUI8 442 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 FAM167BQ9BTA0 163 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 VPS11Q9H270 941 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 KLHL8Q9P2G9 620 aaPredicted RBP12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 SYNPO2Q9UMS6 1093 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 POLIQ9UNA4 740 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 KRT4P19013 534 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 SERPINB6P35237 376 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 GCKP35557 465 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 HIPK4Q8NE63 616 aa12.21□□□□□ -0.45
NIPAL1-201ENST00000295461 EXD1Q8NHP7 514 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms