RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 BTBD10Q9BSF8 475 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ZNF395Q9H8N7 513 aaPredicted RBP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 KCNH7Q9NS40 1196 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 GINM1Q9NU53 330 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ACTL7BQ9Y614 415 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 FAM237BA0A1B0GVD1 139 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 DNALI1O14645 258 aaPredicted RBP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 MAGEB2O15479 319 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TYROBPO43914 113 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 CCDC22O60826 627 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 USP1O94782 785 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SKIP12755 728 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TNNI1P19237 187 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 BGNP21810 368 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 GPX6P59796 221 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SMTNL2Q2TAL5 461 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ANKRD22Q5VYY1 191 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SCARA3Q6AZY7 606 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TMEM270Q6UE05 265 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 NLRX1Q86UT6 975 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 CPXCR1Q8N123 301 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 PYROXD1Q8WU10 500 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 FAM111AQ96PZ2 611 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TMEM120AQ9BXJ8 343 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 MANSC1Q9H8J5 431 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TAS2R1Q9NYW7 299 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SMG5Q9UPR3 1016 aaKnown RBP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 IVNS1ABPQ9Y6Y0 642 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 MYPNQ86TC9 1320 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 F8VP50 259 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 H3BRJ5 948 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 PSMG1O95456 288 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 ENO1P06733 434 aaKnown RBP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
COL8A1-202ENST00000273342 CENPCQ03188 943 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 SPP2Q13103 211 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 OR52E8Q6IFG1 317 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TMEM179Q6ZVK1 233 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 TRIM55Q9BYV6 548 aa13.61□□□□□ -0.23
COL8A1-202ENST00000273342 UBE4BO95155 1302 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 C2CD2LO14523 706 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 PPEF1O14829 653 aaPredicted RBP13.6□□□□□ -0.23
COL8A1-202ENST00000273342 PRPF4O43172 522 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL8A1-202ENST00000273342 LIASO43766 372 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 KCNT1Q5JUK3 1230 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 FNBP1LQ5T0N5 605 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 RASIP1Q5U651 963 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 BBOF1Q8ND07 529 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 PPFIBP2Q8ND30 876 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.6□□□□□ -0.23
COL8A1-202ENST00000273342 FAM136AQ96C01 138 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 PAFAH2Q99487 392 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 TSSK1BQ9BXA7 367 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 C1orf112Q9NSG2 853 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 IRAK4Q9NWZ3 460 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 PSMC3IPQ9P2W1 217 aaPredicted RBP13.6□□□□□ -0.23
COL8A1-202ENST00000273342 HNRNPDLO14979 420 aaKnown RBP13.6□□□□□ -0.23
COL8A1-202ENST00000273342 P4HA2O15460 535 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 BBOX1O75936 387 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 MYL2P10916 166 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 MUTP22033 750 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 YWHABP31946 246 aaKnown RBP13.6□□□□□ -0.23
COL8A1-202ENST00000273342 PGM1P36871 562 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 SHKBP1Q8TBC3 707 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 NSL1Q96IY1 281 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 MECRQ9BV79 373 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 TMEM8AQ9HCN3 771 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 TCEAL9Q9UHQ7 104 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 LRCH1Q9Y2L9 728 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 ATRNL1Q5VV63 1379 aa13.6□□□□□ -0.23
COL8A1-202ENST00000273342 CLRN2A0PK11 232 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 E7ENQ6 273 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 NPTXRO95502 500 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 GLRA2P23416 452 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 ACOT2P49753 483 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 GDF10P55107 478 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 ROR2Q01974 943 aaKnown RBP13.59□□□□□ -0.23
COL8A1-202ENST00000273342 SLC34A1Q06495 639 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 MAMLD1Q13495 774 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 WDR72Q3MJ13 1102 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 SEZ6Q53EL9 994 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 RC3H1Q5TC82 1133 aaKnown RBP13.59□□□□□ -0.23
COL8A1-202ENST00000273342 CENPUQ71F23 418 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 AGBL1Q96MI9 1066 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 GBP5Q96PP8 586 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 COA1Q9GZY4 146 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 TMX4Q9H1E5 349 aaPredicted RBP13.59□□□□□ -0.23
COL8A1-202ENST00000273342 WDR35Q9P2L0 1181 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 TAF1LQ8IZX4 1826 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 TCRBV7S3A2A0A539 114 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 B2RBV5 119 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 HARSP12081 509 aaKnown RBP13.59□□□□□ -0.23
COL8A1-202ENST00000273342 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
COL8A1-202ENST00000273342 WNT7BP56706 349 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 HIF1AQ16665 826 aa13.59□□□□□ -0.23
COL8A1-202ENST00000273342 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms