RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 RIPK1Q13546 671 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 SF3B4Q15427 424 aaKnown RBP eCLIP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 LRIT3Q3SXY7 679 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 CEP55Q53EZ4 464 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 TTC22Q5TAA0 569 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 EEF1A1P5Q5VTE0 462 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 FNIP1Q8TF40 1166 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 MCRS1Q96EZ8 462 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 HEPHQ9BQS7 1158 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 RABGEF1Q9UJ41 708 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 BAG5Q9UL15 447 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 GRID1Q9ULK0 1009 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 APOBEC2Q9Y235 224 aaKnown RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 NOX1Q9Y5S8 564 aa9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 RPAP1Q9BWH6 1393 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL-201ENST00000273179 CDK2AP1O14519 115 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 NR1I2O75469 434 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 ESRRAP11474 423 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 GAP43P17677 238 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 VARSP26640 1264 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CTHP32929 405 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CACNA2D1P54289 1103 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 LAPTM5Q13571 262 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 RNASEH2BQ5TBB1 312 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SYDE2Q5VT97 1194 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TMTC3Q6ZXV5 915 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 ANKRD44Q8N8A2 993 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TMEM237Q96Q45 408 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 RAB3IPQ96QF0 476 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 EYA1Q99502 592 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 KIAA1586Q9HCI6 787 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 GIN1Q9NXP7 522 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SLAIN2Q9P270 581 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 LRRC7Q96NW7 1537 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 A0A1W2PQ67 120 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 PRSS44E7EML9 344 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 P4HBP07237 508 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CDK4P11802 303 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TATP17735 454 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CRABP2P29373 138 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 PPP3CCP48454 512 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CCNA1P78396 465 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 GALNT3Q14435 633 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TIGD6Q17RP2 521 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 GPATCH4Q5T3I0 446 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 MACC1Q6ZN28 852 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CD302Q8IX05 232 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 DNAJC9Q8WXX5 260 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TBC1D10AQ9BXI6 508 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 GOLPH3LQ9H4A5 285 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 ENAMQ9NRM1 1142 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SYBUQ9NX95 663 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 PNPLA6Q8IY17 1366 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 E7ENQ6 273 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 ZNF45Q02386 682 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SULT2A1Q06520 285 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 STILQ15468 1287 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 MYLK3Q32MK0 819 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TTBK2Q6IQ55 1244 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SLC51BQ86UW2 128 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TMTC1Q8IUR5 882 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 P3H2Q8IVL5 708 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 POF1BQ8WVV4 589 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 RFKQ969G6 155 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 METTL2AQ96IZ6 378 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 DNAJC1Q96KC8 554 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 ZNF717Q9BY31 904 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 PITHD1Q9GZP4 211 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TMEM60Q9H2L4 133 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TXLNGQ9NUQ3 528 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CNOT7Q9UIV1 285 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 KIF24Q5T7B8 1368 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 ANKRD34BA5PLL1 514 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 RASSF9O75901 435 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 LSP1P33241 339 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 MTIF2P46199 727 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 AK2P54819 239 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 PPP2R2BQ00005 443 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 C8orf74Q6P047 294 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SCUBE3Q8IX30 993 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 SLC29A1Q99808 456 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 XKR8Q9H6D3 395 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 DNAJC11Q9NVH1 559 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 HMG20BQ9P0W2 317 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 MBD1Q9UIS9 605 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 DBNLQ9UJU6 430 aaKnown RBP9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 CLEC11AQ9Y240 323 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 TMX2Q9Y320 296 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 PCDHB2Q9Y5E7 798 aa9.31□□□□□ -0.92
CTDSPL-201ENST00000273179 ATP6V1G2-DDX39BF2Z307 99 aa9.3□□□□□ -0.92
CTDSPL-201ENST00000273179 LARGE1O95461 756 aa9.3□□□□□ -0.92
CTDSPL-201ENST00000273179 PLEKP08567 350 aaPredicted RBP9.3□□□□□ -0.92
CTDSPL-201ENST00000273179 PAMP19021 973 aa9.3□□□□□ -0.92
CTDSPL-201ENST00000273179 AXLP30530 894 aa9.3□□□□□ -0.92
CTDSPL-201ENST00000273179 GALNSP34059 522 aa9.3□□□□□ -0.92
CTDSPL-201ENST00000273179 CCNFP41002 786 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms