RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 FAM213AQ9BRX8 229 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TRIM51Q9BSJ1 452 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 TUBA8Q9NY65 449 aaPredicted RBP12.61□□□□□ -0.39
SRRM4-201ENST00000267260 HOXC10Q9NYD6 342 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 ATP7BP35670 1465 aa12.61□□□□□ -0.39
SRRM4-201ENST00000267260 USP17L3A6NCW0 530 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 USP17L4A6NCW7 530 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 AKT1P31749 480 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 SOAT1P35610 550 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 PTPN21Q16825 1174 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 YAF2Q8IY57 180 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 PIGOQ8TEQ8 1089 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 YIPF2Q9BWQ6 316 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 CATSPERBQ9H7T0 1116 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 IARS2Q9NSE4 1012 aaKnown RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 DKK3Q9UBP4 350 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 CCT8P50990 548 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ITGB3BPQ13352 177 aaPredicted RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 FAM83EQ2M2I3 478 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF394Q53GI3 561 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 PID1Q7Z2X4 250 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 UNC45BQ8IWX7 931 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 UBASH3BQ8TF42 649 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 GGT7Q9UJ14 662 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 B2RBV5 119 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ZBTB5O15062 677 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 CDC40O60508 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ALDH1A2O94788 518 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 MYL3P08590 195 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 HNRNPH1P31943 449 aaKnown RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 SARSP49591 514 aaKnown RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ARHGEF7Q14155 803 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 HIST2H2ACQ16777 129 aaPredicted RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 SPANXN2Q5MJ10 180 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF618Q5T7W0 954 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 CACHD1Q5VU97 1274 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 HIST2H2AA3Q6FI13 130 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 TRIM66O15016 1216 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 KCNJ6P48051 423 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 GPD1LQ8N335 351 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 RMDN3Q96TC7 470 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 GREM2Q9H772 168 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ST8SIA6P61647 398 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 C18orf8Q96DM3 657 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 VTA1Q9NP79 307 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ING3Q9NXR8 418 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 S100A6P06703 90 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 JAK1P23458 1154 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ITGA1P56199 1179 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ATP1A4Q13733 1029 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ITIH4Q14624 930 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 LATS2Q9NRM7 1088 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 BTN3A3O00478 584 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 CYP21A2P08686 494 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 WARSP23381 471 aaKnown RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 TGFBR2P37173 567 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 SERPINB8P50452 374 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 PEX5P50542 639 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 ERFP50548 548 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 FAM98CQ17RN3 349 aaKnown RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 PADI6Q6TGC4 694 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 NANOGNBQ7Z5D8 188 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
SRRM4-201ENST00000267260 WDR36Q8NI36 951 aaKnown RBP12.6□□□□□ -0.39
SRRM4-201ENST00000267260 FAM47E-STBD1D6RA91 191 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 DYRK3O43781 588 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ATP9BO43861 1147 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 TBC1D12O60347 775 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 PGK2P07205 417 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ADORA1P30542 326 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 PMF1Q6P1K2 205 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 IFNEQ86WN2 208 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 CYP4Z2PQ8N1L4 340 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ALG13Q9NP73 1137 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 RABGEF1Q9UJ41 708 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 TSR3Q9UJK0 312 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 SLC16A2P36021 539 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 LGALS3BPQ08380 585 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 NLGN1Q8N2Q7 840 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 MIEF2Q96C03 454 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 C11orf70Q9BRQ4 267 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 MANSC1Q9H8J5 431 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 PAK5Q9P286 719 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 LSM7Q9UK45 103 aaKnown RBP12.59□□□□□ -0.39
SRRM4-201ENST00000267260 VAV3Q9UKW4 847 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 TMCC3Q9ULS5 477 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 BCS1LQ9Y276 419 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 NEU2Q9Y3R4 380 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 A0A1W2PRG6 482 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 ESYT3A0FGR9 886 aa12.59□□□□□ -0.39
SRRM4-201ENST00000267260 PRIM2P49643 509 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms