RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NHEJ1Q9H9Q4 299 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 Q9Y3F1 56 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 MAP2K7O14733 419 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 MUSKO15146 869 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 ASAP2O43150 1006 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 BUB1BO60566 1050 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 SYF2O95926 243 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 MMP2P08253 660 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 PYGMP11217 842 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 CYP11B1P15538 503 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 GARTP22102 1010 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 MAGEA3P43357 314 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 GJA8P48165 433 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 NOLC1Q14978 699 aaKnown RBP eCLIP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 BRDTQ58F21 947 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 CGB2Q6NT52 195 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 XRRA1Q6P2D8 792 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 NFRKBQ6P4R8 1299 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 SPATA33Q96N06 139 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 FAM207AQ9NSI2 230 aaPredicted RBP6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 SNTG2Q9NY99 539 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 PADI3Q9ULW8 664 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 SNX10Q9Y5X0 201 aa6.11□□□□□ -1.43
TOPBP1-201ENST00000260810 MUC6Q6W4X9 2439 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 CCDC194A0A1B0GVG4 234 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 SBK3P0C264 359 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 FCARP24071 287 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 STAT6P42226 847 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 ZNF658BQ4V348 819 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 FRMD5Q7Z6J6 570 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 AMER2Q8N7J2 671 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 GOLGA6L1Q8N7Z2 621 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 FAM184AQ8NB25 1140 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 ZBED2Q9BTP6 218 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 RNF38Q9H0F5 515 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 CUEDC2Q9H467 287 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 PARVGQ9HBI0 331 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 TBC1D22BQ9NU19 505 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 PARP2Q9UGN5 583 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 COL4A3BPQ9Y5P4 624 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 F8VP50 259 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 ZNF623O75123 536 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 USP14P54578 494 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 OASLQ15646 514 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 STXBP2Q15833 593 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 UVSSAQ2YD98 709 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 STXBP5Q5T5C0 1151 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 PLEKHA7Q6IQ23 1121 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 TRIM22Q8IYM9 498 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 SMYD2Q9NRG4 433 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 DNMT3BQ9UBC3 853 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 ADAMTS1Q9UHI8 967 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 KIF26BQ2KJY2 2108 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 DHX16O60231 1041 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 LRCH4O75427 683 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 IGLV3-27P01718 113 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 HSPA6P17066 643 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 CD52P31358 61 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 PI4KAP42356 2102 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 GUCY2DQ02846 1103 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 XKR3Q5GH77 459 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 AFMIDQ63HM1 303 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 ADGRD2Q7Z7M1 963 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 GSPT2Q8IYD1 628 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 SCAMP5Q8TAC9 235 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 BBXQ8WY36 941 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 RAPGEF5Q92565 580 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 JPH2Q9BR39 696 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 TWSG1Q9GZX9 223 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 RALGAPA1Q6GYQ0 2036 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 EIF4A3P38919 411 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 LRRC63Q05C16 580 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 FSCN1Q16658 493 aaKnown RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 PHTF2Q8N3S3 785 aa6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 NAP1L2Q9ULW6 460 aaPredicted RBP6.1□□□□□ -1.43
TOPBP1-201ENST00000260810 LOC102724159A0A0B4J2E5 919 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 ENPP3O14638 875 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 STAU1O95793 577 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 SLC25A27O95847 323 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 EIF4BP23588 611 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 MAP2K1Q02750 393 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 PWP2Q15269 919 aaKnown RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 HS1BP3Q53T59 392 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 ARHGEF16Q5VV41 709 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 DCAF15Q66K64 600 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 ZSWIM9Q86XI8 627 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 NRTNQ99748 197 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 CLSTN3Q9BQT9 956 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 C20orf27Q9GZN8 174 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 ZNF302Q9NR11 478 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 TCEAL9Q9UHQ7 104 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 OR51B4Q9Y5P0 310 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 SCN2AQ99250 2005 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 PTPRBP23467 1997 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 BTNL10A8MVZ5 291 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 MYL1P05976 194 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 KLRC2P26717 231 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 HERC4Q5GLZ8 1057 aaPredicted RBP6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 FBXO38Q6PIJ6 1188 aa6.09□□□□□ -1.43
TOPBP1-201ENST00000260810 XYLT1Q86Y38 959 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms