RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CAV1Q03135 178 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 BRDTQ58F21 947 aaPredicted RBP20.03■□□□□ 0.8
SNX4-201ENST00000251775 DCAF15Q66K64 600 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 ACAD10Q6JQN1 1059 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 ABHD15Q6UXT9 468 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 ANKRD35Q8N283 1001 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 MCPH1Q8NEM0 835 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 TTC8Q8TAM2 541 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 SLC16A10Q8TF71 515 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 MAML1Q92585 1016 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 SYT15Q9BQS2 421 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 POLR3FQ9H1D9 316 aaPredicted RBP20.03■□□□□ 0.8
SNX4-201ENST00000251775 SLCO1B3Q9NPD5 702 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 GJA3Q9Y6H8 435 aa20.03■□□□□ 0.8
SNX4-201ENST00000251775 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
SNX4-201ENST00000251775 SNUPNO95149 360 aaKnown RBP20.02■□□□□ 0.8
SNX4-201ENST00000251775 NEFHP12036 1026 aa20.02■□□□□ 0.8
SNX4-201ENST00000251775 ATF2P15336 505 aa20.02■□□□□ 0.8
SNX4-201ENST00000251775 GARTP22102 1010 aa20.02■□□□□ 0.8
SNX4-201ENST00000251775 PTDSS1P48651 473 aaKnown RBP20.02■□□□□ 0.8
SNX4-201ENST00000251775 SYDE1Q6ZW31 735 aaPredicted RBP20.02■□□□□ 0.8
SNX4-201ENST00000251775 BICD1Q96G01 975 aa20.02■□□□□ 0.8
SNX4-201ENST00000251775 PICK1Q9NRD5 415 aa20.02■□□□□ 0.8
SNX4-201ENST00000251775 ARHGAP28Q9P2N2 729 aa20.02■□□□□ 0.8
SNX4-201ENST00000251775 NFASCO94856 1347 aa20.02■□□□□ 0.8
SNX4-201ENST00000251775 H0Y3Z8 333 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 DKC1O60832 514 aaKnown RBP eCLIP20.02■□□□□ 0.79
SNX4-201ENST00000251775 KRT5P13647 590 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 PECAM1P16284 738 aaPredicted RBP20.02■□□□□ 0.79
SNX4-201ENST00000251775 VPS41P49754 854 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 OAZ1P54368 228 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 RTP1P59025 263 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 STAT4Q14765 748 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 TMED2Q15363 201 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 WASHC2DQ5SRD0 308 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 LMBRD2Q68DH5 695 aaPredicted RBP20.02■□□□□ 0.79
SNX4-201ENST00000251775 SLC30A9Q6PML9 568 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 C9orf72Q96LT7 481 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 UVRAGQ9P2Y5 699 aa20.02■□□□□ 0.79
SNX4-201ENST00000251775 LRRD1A4D1F6 860 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 SPAG7O75391 227 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 ACADSP16219 412 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 ADCY8P40145 1251 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 WNT7BP56706 349 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 MTERF2Q49AM1 385 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 ZNF449Q6P9G9 518 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 C15orf39Q6ZRI6 1047 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 USP37Q86T82 979 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 DENND2DQ9H6A0 471 aaPredicted RBP20.01■□□□□ 0.79
SNX4-201ENST00000251775 NPTXRO95502 500 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 LMNB2Q03252 620 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 LBRQ14739 615 aaKnown RBP20.01■□□□□ 0.79
SNX4-201ENST00000251775 CLEC16AQ2KHT3 1053 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 DENND1AQ8TEH3 1009 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 C12orf42Q96LP6 360 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 TSC22D3Q99576 134 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 DCLK3Q9C098 648 aa20.01■□□□□ 0.79
SNX4-201ENST00000251775 SPATA31C2B4DYI2 1134 aa20■□□□□ 0.79
SNX4-201ENST00000251775 ENTPD5O75356 428 aa20■□□□□ 0.79
SNX4-201ENST00000251775 AP1G2O75843 785 aa20■□□□□ 0.79
SNX4-201ENST00000251775 DCTN3O75935 186 aa20■□□□□ 0.79
SNX4-201ENST00000251775 CBX6O95503 412 aa20■□□□□ 0.79
SNX4-201ENST00000251775 GAS8O95995 478 aa20■□□□□ 0.79
SNX4-201ENST00000251775 MXRA7P84157 204 aa20■□□□□ 0.79
SNX4-201ENST00000251775 SP2Q02086 613 aa20■□□□□ 0.79
SNX4-201ENST00000251775 GCNT1Q02742 428 aa20■□□□□ 0.79
SNX4-201ENST00000251775 RBBP5Q15291 538 aaKnown RBP20■□□□□ 0.79
SNX4-201ENST00000251775 SGSM1Q2NKQ1 1148 aa20■□□□□ 0.79
SNX4-201ENST00000251775 GNPTABQ3T906 1256 aa20■□□□□ 0.79
SNX4-201ENST00000251775 RNF217Q8TC41 542 aa20■□□□□ 0.79
SNX4-201ENST00000251775 GRID1Q9ULK0 1009 aa20■□□□□ 0.79
SNX4-201ENST00000251775 NEU2Q9Y3R4 380 aa20■□□□□ 0.79
SNX4-201ENST00000251775 RRM1P23921 792 aa20■□□□□ 0.79
SNX4-201ENST00000251775 MAN1A1P33908 653 aa20■□□□□ 0.79
SNX4-201ENST00000251775 RGS9BPQ6ZS82 235 aa20■□□□□ 0.79
SNX4-201ENST00000251775 TRABD2AQ86V40 505 aa20■□□□□ 0.79
SNX4-201ENST00000251775 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
SNX4-201ENST00000251775 C10orf82Q8WW14 230 aa20■□□□□ 0.79
SNX4-201ENST00000251775 CCDC77Q9BR77 488 aa20■□□□□ 0.79
SNX4-201ENST00000251775 PLVAPQ9BX97 442 aa20■□□□□ 0.79
SNX4-201ENST00000251775 TRAFD1O14545 582 aaPredicted RBP19.99■□□□□ 0.79
SNX4-201ENST00000251775 GNAT1P11488 350 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 PAPOLAP51003 745 aaKnown RBP19.99■□□□□ 0.79
SNX4-201ENST00000251775 KLC1Q07866 573 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 SH3TC2Q8TF17 1288 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 GRK7Q8WTQ7 553 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 DNAJC9Q8WXX5 260 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 TEX13BQ9BXU2 312 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 ACAD9Q9H845 621 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 PAPOLBQ9NRJ5 636 aaKnown RBP19.99■□□□□ 0.79
SNX4-201ENST00000251775 ETAA1Q9NY74 926 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 R3HDM2Q9Y2K5 976 aaKnown RBP19.99■□□□□ 0.79
SNX4-201ENST00000251775 ASB3Q9Y575 518 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 EXTL3O43909 919 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 EDF1O60869 148 aaKnown RBP19.99■□□□□ 0.79
SNX4-201ENST00000251775 SMIM24O75264 130 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 UNGP13051 313 aaPredicted RBP19.99■□□□□ 0.79
SNX4-201ENST00000251775 GCAP28676 217 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 LIG4P49917 911 aa19.99■□□□□ 0.79
SNX4-201ENST00000251775 RAB27AP51159 221 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms