RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 LMBRD2Q68DH5 695 aaPredicted RBP18.47■□□□□ 0.55
PRPF19-201ENST00000227524 SAMD3Q8N6K7 520 aa18.47■□□□□ 0.55
PRPF19-201ENST00000227524 KCNV2Q8TDN2 545 aa18.47■□□□□ 0.55
PRPF19-201ENST00000227524 SYTL5Q8TDW5 730 aaPredicted RBP18.47■□□□□ 0.55
PRPF19-201ENST00000227524 INPP5DQ92835 1189 aa18.47■□□□□ 0.55
PRPF19-201ENST00000227524 RAVER2Q9HCJ3 691 aaKnown RBP18.47■□□□□ 0.55
PRPF19-201ENST00000227524 HAO1Q9UJM8 370 aa18.47■□□□□ 0.55
PRPF19-201ENST00000227524 DNPEPQ9ULA0 475 aa18.47■□□□□ 0.55
PRPF19-201ENST00000227524 COL11A1P12107 1806 aaPredicted RBP18.46■□□□□ 0.55
PRPF19-201ENST00000227524 DCTN3O75935 186 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 HLA-DRAP01903 254 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 ZSCAN5DPP0CG00 497 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 PECAM1P16284 738 aaPredicted RBP18.46■□□□□ 0.55
PRPF19-201ENST00000227524 KRT15P19012 456 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 SFNP31947 248 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 NFX1Q12986 1120 aaKnown RBP18.46■□□□□ 0.55
PRPF19-201ENST00000227524 CCDC142Q17RM4 750 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 EAPPQ56P03 285 aaPredicted RBP18.46■□□□□ 0.55
PRPF19-201ENST00000227524 WDR44Q5JSH3 913 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 PLEKHA7Q6IQ23 1121 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 TRIM72Q6ZMU5 477 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 CPXCR1Q8N123 301 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 C4orf33Q8N1A6 199 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 TAAR1Q96RJ0 339 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 SMC6Q96SB8 1091 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 RNF181Q9P0P0 153 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 SENP1Q9P0U3 644 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 NKX1-2Q9UD57 310 aaPredicted RBP18.46■□□□□ 0.55
PRPF19-201ENST00000227524 SCINQ9Y6U3 715 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 PAPPA2Q9BXP8 1791 aa18.46■□□□□ 0.55
PRPF19-201ENST00000227524 PI4K2BG5E9Z4 385 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 KRT10P13645 584 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 ACO1P21399 889 aaKnown RBP18.45■□□□□ 0.54
PRPF19-201ENST00000227524 SSTR3P32745 418 aaPredicted RBP18.45■□□□□ 0.54
PRPF19-201ENST00000227524 RPA3P35244 121 aaPredicted RBP18.45■□□□□ 0.54
PRPF19-201ENST00000227524 PGM5Q15124 567 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 HP1BP3Q5SSJ5 553 aaPredicted RBP18.45■□□□□ 0.54
PRPF19-201ENST00000227524 KAZNQ674X7 775 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 SPOPLQ6IQ16 392 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 LRRC8CQ8TDW0 803 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 C10orf82Q8WW14 230 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 VCPIP1Q96JH7 1222 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 TLR3O15455 904 aaKnown RBP18.45■□□□□ 0.54
PRPF19-201ENST00000227524 PEX11AO75192 247 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 MYCLP12524 364 aaPredicted RBP18.45■□□□□ 0.54
PRPF19-201ENST00000227524 ETS1P14921 441 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 GNAZP19086 355 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 CDC25CP30307 473 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 CETN2P41208 172 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 PIK3CAP42336 1068 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 ARSEP51690 589 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 KRT76Q01546 638 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 SLC1A5Q15758 541 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 PHF13Q86YI8 300 aaPredicted RBP18.45■□□□□ 0.54
PRPF19-201ENST00000227524 ABRAQ8N0Z2 381 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 ALLCQ8N6M5 410 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 BICD1Q96G01 975 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 ANKRD27Q96NW4 1050 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 SLITRK1Q96PX8 696 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 VPS37BQ9H9H4 285 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 C17orf75Q9HAS0 396 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 RNPEPL1Q9HAU8 725 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 PICK1Q9NRD5 415 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 ZNF148Q9UQR1 794 aa18.45■□□□□ 0.54
PRPF19-201ENST00000227524 SKAP2O75563 359 aaPredicted RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 SMNDC1O75940 238 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 CA4P22748 312 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 ALDH3A1P30838 453 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 HMGCS2P54868 508 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 GPS1Q13098 491 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 TAF11Q15544 211 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 ZACNQ401N2 412 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 ATP13A4Q4VNC1 1196 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 BRDTQ58F21 947 aaPredicted RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 TDRD10Q5VZ19 366 aaKnown RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 DRICH1Q6PGQ1 229 aaPredicted RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.44■□□□□ 0.541e-14■■■■□ 25
PRPF19-201ENST00000227524 SLC7A6OSQ96CW6 309 aaPredicted RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 RBM41Q96IZ5 413 aaKnown RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 C12orf42Q96LP6 360 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 AS3MTQ9HBK9 375 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 HOMER2Q9NSB8 354 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 LIN7AO14910 233 aaPredicted RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 T-ENOLP0DO92 83 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 GNA15P30679 374 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 WNT7BP56706 349 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 CLDN10P78369 228 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 PSMD6Q15008 389 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 MORF4L2Q15014 288 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 NOL9Q5SY16 702 aaKnown RBP18.44■□□□□ 0.54
PRPF19-201ENST00000227524 CAPN12Q6ZSI9 719 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 TAS1R3Q7RTX0 852 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 RCOR2Q8IZ40 523 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 FAM13CQ8NE31 585 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 FEZF2Q8TBJ5 459 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 ATG4CQ96DT6 458 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 WDR90Q96KV7 1748 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 CEP170P1Q96L14 293 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 CYP39A1Q9NYL5 469 aa18.44■□□□□ 0.54
PRPF19-201ENST00000227524 PCDHB4Q9Y5E5 795 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms