RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 TRPV1Q8NER1 839 aa18.47■□□□□ 0.55
VRK1-201ENST00000216639 CAVIN3Q969G5 261 aa18.47■□□□□ 0.55
VRK1-201ENST00000216639 RUNDC3BQ96NL0 473 aa18.47■□□□□ 0.55
VRK1-201ENST00000216639 EIF2AQ9BY44 585 aaKnown RBP18.47■□□□□ 0.55
VRK1-201ENST00000216639 SDCBP2Q9H190 292 aa18.47■□□□□ 0.55
VRK1-201ENST00000216639 GPBP1L1Q9HC44 474 aaPredicted RBP18.47■□□□□ 0.55
VRK1-201ENST00000216639 AMACRQ9UHK6 382 aa18.47■□□□□ 0.55
VRK1-201ENST00000216639 UTP11Q9Y3A2 253 aaKnown RBP18.47■□□□□ 0.55
VRK1-201ENST00000216639 PSTPIP1O43586 416 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 XPOTO43592 962 aaKnown RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 ATF7P17544 494 aaPredicted RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 CHRNA3P32297 505 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 DHX34Q14147 1143 aaKnown RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 SLC13A5Q86YT5 568 aaPredicted RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 RHOT1Q8IXI2 618 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 MAIP1Q8WWC4 291 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 CASKIN2Q8WXE0 1202 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 TRIB2Q92519 343 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 RAB17Q9H0T7 212 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 CNTN3Q9P232 1028 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 KIAA1257Q9ULG3 409 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 BARX2Q9UMQ3 279 aaPredicted RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 CITO14578 2027 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 RALGAPA2Q2PPJ7 1873 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 PHF2O75151 1096 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 RARBP10826 455 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 VDRP11473 427 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 CARSP49589 748 aaKnown RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 FLT3LGP49771 235 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 GUCY2FP51841 1108 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 INCA1Q0VD86 236 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 LLGL2Q6P1M3 1020 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 DCUN1D2Q6PH85 259 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 ADAT2Q7Z6V5 191 aaKnown RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 RSPH3Q86UC2 560 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 SLC4A11Q8NBS3 891 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 WHAMMQ8TF30 809 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 GDAP1L1Q96MZ0 367 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 ZIC5Q96T25 663 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 UPF3AQ9H1J1 476 aaKnown RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 RASAL2Q9UJF2 1139 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 HPCAL4Q9UM19 191 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 NFU1Q9UMS0 254 aa18.46■□□□□ 0.55
VRK1-201ENST00000216639 UBQLN1Q9UMX0 589 aaKnown RBP18.46■□□□□ 0.55
VRK1-201ENST00000216639 ESYT3A0FGR9 886 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 FAM187AA6NFU0 413 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 ZSCAN5CA6NGD5 496 aaPredicted RBP18.45■□□□□ 0.54
VRK1-201ENST00000216639 SEPT4O43236 478 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 RPLP2P05387 115 aaKnown RBP18.45■□□□□ 0.54
VRK1-201ENST00000216639 OAS2P29728 719 aaKnown RBP18.45■□□□□ 0.54
VRK1-201ENST00000216639 DR1Q01658 176 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 NOGQ13253 232 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 DENND1BQ6P3S1 775 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 CPNE8Q86YQ8 564 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 LRRC52Q8N7C0 313 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 TMEM40Q8WWA1 233 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 CELF4Q9BZC1 486 aaKnown RBP18.45■□□□□ 0.54
VRK1-201ENST00000216639 TRIM7Q9C029 511 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 ARHGAP39Q9C0H5 1083 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 PLEKHA4Q9H4M7 779 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 MED4Q9NPJ6 270 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 WDR35Q9P2L0 1181 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 GABRQQ9UN88 632 aa18.45■□□□□ 0.54
VRK1-201ENST00000216639 MYADML2A6NDP7 307 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 TMEM191CA6NGB0 347 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 RECQL4O94761 1208 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 CD4P01730 458 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 HMGCRP04035 888 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 HLTFQ14527 1009 aaKnown RBP eCLIP18.44■□□□□ 0.54
VRK1-201ENST00000216639 ZBTB6Q15916 424 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 SGO2Q562F6 1265 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 AADACL2Q6P093 401 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 ALKAL1Q6UXT8 129 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 REM2Q8IYK8 340 aaPredicted RBP18.44■□□□□ 0.54
VRK1-201ENST00000216639 WDTC1Q8N5D0 677 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 C3orf20Q8ND61 904 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 HEXIM2Q96MH2 286 aaKnown RBP18.44■□□□□ 0.54
VRK1-201ENST00000216639 ELOVL4Q9GZR5 314 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 NXF3Q9H4D5 531 aaKnown RBP18.44■□□□□ 0.54
VRK1-201ENST00000216639 FAM114A2Q9NRY5 505 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 NR2E1Q9Y466 385 aa18.44■□□□□ 0.54
VRK1-201ENST00000216639 TTI1O43156 1089 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 CETN2P41208 172 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 NKX3-2P78367 333 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 STILQ15468 1287 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 CNGA2Q16280 664 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 CYP4F22Q6NT55 531 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 MAGOHBQ96A72 148 aaKnown RBP18.43■□□□□ 0.54
VRK1-201ENST00000216639 ZMAT2Q96NC0 199 aaKnown RBP18.43■□□□□ 0.54
VRK1-201ENST00000216639 TWNKQ96RR1 684 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 APOL6Q9BWW8 343 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 NT5C1AQ9BXI3 368 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 SYNCQ9H7C4 482 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 GTF2IRD1Q9UHL9 959 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.43■□□□□ 0.54
VRK1-201ENST00000216639 HES2Q9Y543 173 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 SSR1P43307 286 aaKnown RBP18.43■□□□□ 0.54
VRK1-201ENST00000216639 AARSP49588 968 aaKnown RBP eCLIP18.43■□□□□ 0.54
VRK1-201ENST00000216639 NDST1P52848 882 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 MRPS6P82932 125 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms