RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 NEK3P51956 506 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 ALDH18A1P54886 795 aaKnown RBP17.66■□□□□ 0.42
CTDP1-201ENST00000075430 WDR44Q5JSH3 913 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.66■□□□□ 0.42
CTDP1-201ENST00000075430 CFAP36Q96G28 342 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 ZDHHC15Q96MV8 337 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 MCEEQ96PE7 176 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 KMT5AQ9NQR1 393 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 STOML1Q9UBI4 398 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 IVNS1ABPQ9Y6Y0 642 aa17.66■□□□□ 0.42
CTDP1-201ENST00000075430 TBX3O15119 743 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 EDF1O60869 148 aaKnown RBP17.65■□□□□ 0.42
CTDP1-201ENST00000075430 FDX1P10109 184 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 AMPD1P23109 780 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 DSG3P32926 999 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 PGM1P36871 562 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 NT5C2P49902 561 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 UVRAGQ9P2Y5 699 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 CCPG1Q9ULG6 757 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 TBX10O75333 385 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 MYL2P10916 166 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 SP100P23497 879 aaPredicted RBP17.65■□□□□ 0.42
CTDP1-201ENST00000075430 CACNA2D1P54289 1103 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 CLNKQ7Z7G1 428 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 FBXO27Q8NI29 283 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 ARAP2Q8WZ64 1704 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 NFIBO00712 420 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 YWHABP31946 246 aaKnown RBP17.65■□□□□ 0.42
CTDP1-201ENST00000075430 PTK6Q13882 451 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 PRKG1Q13976 671 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 SLC27A3Q5K4L6 730 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 SPDYCQ5MJ68 293 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 ANKRD22Q5VYY1 191 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 RHBDF2Q6PJF5 856 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 ZCCHC23Q6ZST2 131 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 FGD4Q96M96 766 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 TMEM109Q9BVC6 243 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 LRMDAQ9H2I8 198 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 TUFT1Q9NNX1 390 aa17.65■□□□□ 0.42
CTDP1-201ENST00000075430 AVILO75366 819 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 MT-ND3P03897 115 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 GZMAP12544 262 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 CD19P15391 556 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 ITGB5P18084 799 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 ATP6V1C1P21283 382 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 ADSSP30520 456 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 OSTNP61366 133 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 NFX1Q12986 1120 aaKnown RBP17.64■□□□□ 0.42
CTDP1-201ENST00000075430 RINLQ6ZS11 566 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 TSSK1BQ9BXA7 367 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 TRIM55Q9BYV6 548 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 TMEM206Q9H813 350 aa17.64■□□□□ 0.42
CTDP1-201ENST00000075430 CYP1A2P05177 515 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 DACT2Q5SW24 774 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 LIN9Q5TKA1 542 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 STRIP1Q5VSL9 837 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 RHOT1Q8IXI2 618 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 TMEM120AQ9BXJ8 343 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 PTPN4P29074 926 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 RARRES1P49788 294 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 MKRN3Q13064 507 aaKnown RBP17.64■□□□□ 0.41
CTDP1-201ENST00000075430 BMPR2Q13873 1038 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 CLEC16AQ2KHT3 1053 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 POU5F2Q8N7G0 328 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 SHC3Q92529 594 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 DDX27Q96GQ7 796 aaKnown RBP17.64■□□□□ 0.41
CTDP1-201ENST00000075430 ZBTB45Q96K62 511 aaPredicted RBP17.64■□□□□ 0.41
CTDP1-201ENST00000075430 CEP170P1Q96L14 293 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 CALN1Q9BXU9 219 aa17.64■□□□□ 0.41
CTDP1-201ENST00000075430 LPXNO60711 386 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 SKIP12755 728 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 PPM1NQ8N819 430 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 PPP1R14CQ8TAE6 165 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 HELQQ8TDG4 1101 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 RSAD2Q8WXG1 361 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 MANSC1Q9H8J5 431 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 KIAA1551Q9HCM1 1747 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 CCNB1P14635 433 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 GNA15P30679 374 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 HIF1AQ16665 826 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 CYP1B1Q16678 543 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 BSPRYQ5W0U4 402 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 CENPUQ71F23 418 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 SHKBP1Q8TBC3 707 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 AGR3Q8TD06 166 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 ASAP3Q8TDY4 903 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 NRG4Q8WWG1 115 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 ACAP3Q96P50 834 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 PAFAH2Q99487 392 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 TRIM56Q9BRZ2 755 aaKnown RBP17.63■□□□□ 0.41
CTDP1-201ENST00000075430 C4orf50Q6ZRC1 276 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 LDHDQ86WU2 507 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 CDR2LQ86X02 465 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-201ENST00000075430 ARID3BQ8IVW6 561 aaPredicted RBP17.63■□□□□ 0.41
CTDP1-201ENST00000075430 EMC1Q8N766 993 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 FBXO36Q8NEA4 188 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 C10orf82Q8WW14 230 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 GRAMD1AQ96CP6 724 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 ZNF341Q9BYN7 854 aa17.63■□□□□ 0.41
CTDP1-201ENST00000075430 MAGED2Q9UNF1 606 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms