RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Adam6bQ6IMH7 756 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Galnt5Q8C102 930 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ago4Q8CJF8 861 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Stx19Q8R1Q0 292 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 IscuQ9D7P6 168 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ddx20Q9JJY4 825 aaKnown RBP9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ybx3Q9JKB3 361 aaKnown RBP9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ddx39bQ9Z1N5 428 aaKnown RBP9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Myh1Q5SX40 1942 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Zfp266E9Q2S7 604 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ctnnd2O35927 1247 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 RenbpP82343 430 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 DaglaQ6WQJ1 1044 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Chordc1Q9D1P4 331 aaKnown RBP9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Fam173bQ9D1Z3 247 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Sh2d4aQ9D7V1 421 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tnni1Q9WUZ5 187 aa9.64□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Kpna2P52293 529 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rab6bP61294 208 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Trim43cP86449 446 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 ZyxQ62523 564 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Npdc1Q64322 332 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ptk6Q64434 451 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mettl25Q6NXH8 597 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Xlr3bQ6P205 226 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ssxb5Q6XAS2 159 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Pip4k2cQ91XU3 421 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tex9Q9D845 387 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Cyp39a1Q9JKJ9 470 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mtmr1Q9Z2C4 669 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 4930444G20RikD3Z741 495 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm3424L7N298 263 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm8246M0QWX9 263 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Magea1O89006 320 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Magea5O89009 320 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 PRAG1Q571I4 1179 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Krt72Q6IME9 520 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Nup107Q8BH74 926 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Trim8Q99PJ2 551 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 EtfbQ9DCW4 255 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rbp7Q9EPC5 134 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ing2Q9ESK4 281 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Cul3Q9JLV5 768 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Magea2Q9R2A2 320 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mzf1S4R1L6 814 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Plcg1Q62077 1302 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Zmynd8A2A484 1235 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Bnip3O55003 187 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 AurkbO70126 345 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 RelaQ04207 549 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gsdmc4Q3TR54 480 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Olfm4Q3UZZ4 505 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tigd5Q499M4 642 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Eps15l1Q60902 907 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Naif1Q6PFD7 327 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Chn2Q80XD1 332 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Krt75Q8BGZ7 551 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 SowahdQ8BY98 327 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Efl1Q8C0D5 1127 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Prl7b1Q8CGZ9 251 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Pglyrp2Q8VCS0 530 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ndufa5Q9CPP6 116 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Micu3Q9CTY5 523 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Prl2c5Q9JLV9 222 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Dkk3Q9QUN9 349 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Arih1Q9Z1K5 555 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Maml3D4QGC2 1135 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Kif1cO35071 1100 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Npy5rO70342 466 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Atp6v1b1Q91YH6 513 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mtif2Q91YJ5 727 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Mapk9Q9WTU6 423 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Col14a1Q80X19 1797 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Tsc22d2E9Q7M2 769 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm10250G3X9L6 160 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 AF366264G3X9P9 502 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Il27raO70394 623 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Usp10P52479 792 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rhbdl3P58873 404 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 EsrrgP62509 458 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 4930502E18RikQ14BQ3 236 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ndufaf2Q59J78 168 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Znf148Q61624 794 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Acot5Q6Q2Z6 421 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 RadxQ8C779 850 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Pcdha10Q91Y20 946 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Atp5hQ9DCX2 161 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Crb1Q8VHS2 1405 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Zfyve9A2A8R0 1397 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Rhbdl2A2AGA4 302 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Krt28A6BLY7 462 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gm10639E9Q6L7 222 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Gsta2P10648 222 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Sipa1P46062 1037 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Adamts18Q4VC17 1219 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ces1eQ64176 562 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Papd5Q68ED3 633 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Sv2cQ69ZS6 727 aa9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Ddx42Q810A7 929 aaKnown RBP9.63□□□□□ -0.87
Scn8a-213ENSMUST00000201549 Abraxas1Q8BPZ8 407 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms