RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ddr2Q62371 854 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Havcr2Q8VIM0 281 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Jag1Q9QXX0 1218 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tp53P02340 387 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Q3KNL4 93 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 C6.1alQ7M757 291 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zfp454Q80Y34 536 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Atg16l1Q8C0J2 607 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 PorcnQ9JJJ7 461 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Serpinb3cA2RSF9 386 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 GlrbP48168 496 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Wfs1P56695 890 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cyfip2Q5SQX6 1253 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Mxd4Q60948 209 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Castor2Q8CAB8 329 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Slc13a3Q91Y63 600 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Polr3cQ9D483 533 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Dlg5E9Q9R9 1921 aa12.46□□□□□ -0.41
Pcif1-201ENSMUST00000041643 GaaP70699 953 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cbx8Q9QXV1 362 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Lypla2Q9WTL7 231 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm36028A0A0U1RPM1 299 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cyp4a12bA2A974 508 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 PtgisO35074 501 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 EpoP07321 192 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Irx1P81068 480 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Celf4Q7TSY6 486 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cyp4a12aQ91WL5 508 aa12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zcchc17Q9ESX4 241 aaKnown RBP12.46□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Atp9aO70228 1047 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 TnfP06804 235 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rnf10Q3UIW5 804 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Fam8a1Q3URQ4 399 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rgl2Q61193 778 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tmem130Q6NXM3 419 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Garem2Q6PAJ3 880 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 MtrrQ8C1A3 696 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Stau2Q8CJ67 570 aaKnown RBP12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Agap3Q8VHH5 910 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Xpo7Q9EPK7 1087 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Orc3Q9JK30 715 aaKnown RBP12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 1700031M16RikA0A087WSH0 82 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Lcn6A2AJB9 181 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 UgcgO88693 394 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Aldh2P47738 519 aaKnown RBP12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 RadilQ69Z89 1099 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Kbtbd3Q8BHI4 607 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Brat1Q8C3R1 822 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Thoc1Q8R3N6 657 aaKnown RBP12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Psma8Q9CWH6 250 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Thg1lQ9CY52 298 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mcf2A2AEU1 1111 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Lrrc73B2RWC4 316 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Eno1P17182 434 aaKnown RBP12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Stx1bP61264 288 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Spink5Q148R4 1017 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 InscQ3HNM7 579 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mapre1Q61166 268 aaKnown RBP12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Srd5a1Q68FF9 255 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gprc5aQ8BHL4 356 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rps6kc1Q8BLK9 1056 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Setdb2Q8C267 713 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Onecut3Q8K557 490 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Olfr1352Q8VGX5 309 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Eef1akmt2Q9D853 244 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Slc22a3Q9WTW5 551 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Crlf3Q9Z2L7 442 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Klra5Q60652 266 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Slc26a2Q62273 739 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Zdhhc15Q8BGJ0 337 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Sept8Q8CHH9 429 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 HpdlQ8K248 371 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cox18Q8VC74 331 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Utp11Q9CZJ1 253 aaKnown RBP12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gtf2h1Q9DBA9 547 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rnf14Q9JI90 485 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm5160F8VPN3 147 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Sptlc1O35704 473 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 NfiaQ02780 532 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Prmt9Q3U3W5 846 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 A1cfQ5YD48 595 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tas2r125Q7M710 311 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ttc7aQ8BGB2 858 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gpr180Q8BPS4 441 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Proser2Q8C5R2 471 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Prpf39Q8K2Z2 665 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 PmpcbQ9CXT8 489 aa12.45□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Col3a1P08121 1464 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mroh4G3X8W1 983 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Stam2O88811 523 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Micall2Q3TN34 1009 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cyp2c66Q5GLZ0 490 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rint1Q8BZ36 792 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Capn9Q9D805 690 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cog8Q9JJA2 640 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 2210011C24RikA0A087WQ89 206 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Oas1aP11928 367 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rab6bP61294 208 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Sema5bQ60519 1093 aa12.44□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rimbp2Q80U40 1072 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms