RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Hspa4lP48722 838 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Mark2Q05512 776 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 PRAG1Q571I4 1179 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Ssxb10Q6XAR7 170 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Dcaf8Q8N7N5 591 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 NelfcdQ922L6 591 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Bap1Q99PU7 728 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Rassf7Q9DD19 359 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Phtf1Q9QZ09 761 aa10.4□□□□□ -0.74
Ldlr-201ENSMUST00000034713 Magea10A2AMW4 325 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 SelenovD3YXG1 328 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tada2bD3Z4Z0 420 aaKnown RBP10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gm379J3QQ19 296 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Krt4P07744 525 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 NfibP97863 570 aaKnown RBP10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 NfiaQ02780 532 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pou6f1Q07916 301 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Znf579Q80VM4 562 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Best2Q8BGM5 508 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 DcakdQ8BHC4 231 aaKnown RBP10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 4932411N23RikQ8C0S0 470 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Inpp5fQ8CDA1 1132 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 CopaQ8CIE6 1224 aaKnown RBP10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tgif2lx2Q8K5B9 231 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Taf6lQ8R2K4 616 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Sirt2Q8VDQ8 389 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Olfr805Q8VFI4 319 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Snx5Q9D8U8 404 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 RecqlQ9Z129 648 aa10.4□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Akap11E9Q777 1895 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 UmpsP13439 481 aaKnown RBP10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pla2g6P97819 807 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Q3KNL4 93 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Trmt1Q3TX08 663 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Hif1aQ61221 836 aaKnown RBP10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Fam214aQ69ZK7 1075 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Mettl25Q6NXH8 597 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ric8bQ80XE1 520 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Olfr395Q8VGR3 312 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Dnajc9Q91WN1 259 aaKnown RBP10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Slc12a6Q924N4 1150 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ttc30a1Q99J38 664 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 DtnaQ9D2N4 746 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Terb2Q9D494 218 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Capn7Q9R1S8 813 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Orc1Q9Z1N2 840 aaKnown RBP10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Kank3Q9Z1P7 791 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Bpifb9bA2AJD1 591 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Il27raO70394 623 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gxylt1Q3UHH8 404 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Fam8a1Q3URQ4 399 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Capn13Q3UW68 665 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Apol7eQ3UZ24 369 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 UrgcpQ5NCI0 926 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Grid1Q61627 1009 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Map3k10Q66L42 940 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Nudt16Q6P3D0 195 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Bpifb9aQ80XI7 591 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Znf879Q8BI99 563 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Gcfc2Q8BKT3 769 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Fcho1Q8K285 873 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Zmat2Q9CPW7 199 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Castor1Q9CWQ8 331 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 PalmdQ9JHU2 551 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Zfp984A2A7A2 547 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Lonrf1D3YY23 762 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 ChrngP04760 519 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Bcat1P24288 386 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 SftpdP50404 374 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Serpina1eQ00898 413 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Krt80Q0VBK2 452 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Sh2d1b2Q45HK4 132 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 RetsatQ64FW2 609 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 AarsQ8BGQ7 968 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tmem117Q8BH18 514 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Chmp2bQ8BJF9 213 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 RadxQ8C779 850 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 GanQ8CA72 597 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 E2f4Q8R0K9 410 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Bhmt2Q91WS4 363 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Tmed5Q9CXE7 229 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Q9CYI0 393 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 TcimQ9D915 106 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Rhobtb1Q9DAK3 695 aa10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Atp13a1Q9EPE9 1200 aaKnown RBP10.39□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Col1a1P11087 1453 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Usp17ldG5E8G2 545 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Usp17lcG5E8I7 545 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 E2f6O54917 272 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Mmp10O55123 476 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Xirp1O70373 1129 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Got1P05201 413 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Eno3P21550 434 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Pbxip1Q3TVI8 727 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Slc16a10Q3U9N9 512 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Parp3Q3ULW8 533 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Vmn2r43Q80Z08 845 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Epha10Q8BYG9 1007 aa10.38□□□□□ -0.75
Ldlr-201ENSMUST00000034713 Dnajc14Q921R4 703 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms