RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Q99KU6 348 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Fam212aQ9CX62 282 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Med10Q9CXU0 135 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Snx1Q9WV80 522 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Anapc7Q9WVM3 565 aa13.42□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cep85lA0A1W2P884 806 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 IapP03975 557 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Bmp2P21274 394 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Atp13a5Q3TYU2 1216 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Fam198aQ3UY90 562 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ttc9Q3V038 219 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Abl2Q4JIM5 1182 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm5168Q4KL04 211 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 PighQ5M9N4 188 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tmem45aQ60774 273 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 StilQ60988 1262 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Syn2Q64332 586 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Q6DFW0 481 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mtmr10Q7TPM9 771 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 RbakQ8BQC8 711 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Uba6Q8C7R4 1053 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Calcoco1Q8CGU1 691 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Smyd3Q9CWR2 428 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Proca1B0QZF7 307 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lonrf1D3YY23 762 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 1700064H15RikD3Z4D4 81 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Plekha5E9Q6H8 1269 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Speer2E9Q9U2 264 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Nr2c2P49117 596 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 VcpQ01853 806 aaKnown RBP13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm10392Q3V3I3 114 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Acvrl1Q61288 502 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Orai2Q8BH10 250 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 N4bp3Q8C7U1 537 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Rassf9Q8K342 435 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lrrc14Q8VC16 493 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Glis2Q8VDL9 521 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 1700129C05RikQ9CQ77 218 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Igdcc4Q9EQS9 1252 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Trpc3Q9QZC1 836 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cetn2Q9R1K9 172 aa13.41□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cntnap4Q99P47 1310 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Pcdh15Q99PJ1 1943 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm12394A2AKP6 982 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tatdn2B7ZNL9 783 aaKnown RBP13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cav1P49817 178 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 SbdsP70122 250 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Irx1P81068 480 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lipo3Q3UT41 399 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gpr151Q7TSN6 422 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Taf2Q8C176 1104 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Syt15Q8C6N3 418 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Champ1Q8K327 802 aaKnown RBP13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Vmn1r199Q8R280 367 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zmynd10Q99ML0 440 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tdrd12Q9CWU0 1215 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Limd1Q9QXD8 668 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lrrc10bG3XA50 292 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm5814J3QP80 125 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gjd2O54851 321 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Rnaseh1O70338 285 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 MycnP03966 462 aaKnown RBP13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cetn1P41209 172 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ndufs6P52503 116 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ptprn2P80560 1001 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Senp5Q6NXL6 749 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Vmn2r26Q6TAC4 855 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 MogsQ80UM7 834 aaKnown RBP13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 C2cd2lQ80X80 706 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Haus3Q8QZX2 570 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 St13Q99L47 371 aaKnown RBP13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mrfap1Q9CQL7 125 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Iqcf1Q9D9K8 182 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Eif4e3Q9DBB5 207 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 DmgdhQ9DBT9 869 aa13.4□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Rap1gapA2ALS5 663 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tubb1A2AQ07 451 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Olfr67F8VPJ8 320 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gm17535J3KMR8 224 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gm21962L7N280 338 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Eftud2O08810 971 aaKnown RBP13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Cops5O35864 334 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Krt13P08730 437 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tnnc2P20801 160 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Snx27Q3UHD6 539 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 CpQ61147 1061 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Dpysl3Q62188 570 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Fndc3bQ6NWW9 1207 aaKnown RBP13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 SnphQ80U23 495 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gpc3Q8CFZ4 579 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 UvragQ8K245 698 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gle1Q8R322 699 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 IrgqQ8VIM9 583 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Epn3Q91W69 636 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Chordc1Q9D1P4 331 aaKnown RBP13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Trpc2Q9R244 1172 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Cdr2lA2A6T1 465 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 JrklB2RRL2 523 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 YwhaeP62259 255 aaKnown RBP13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Col6a1Q04857 1025 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms