RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 GabpaQ00422 454 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Mark3Q03141 753 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Smcr8Q3UMB5 935 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Pcsk7Q61139 770 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Wasf2Q8BH43 497 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Olfml3Q8BK62 406 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Ythdf3Q8BYK6 585 aaKnown RBP12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 CenpuQ8C4M7 410 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Q8R1Y2 203 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Usp26Q99MX1 835 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Tpd52l2Q9CYZ2 220 aaKnown RBP12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 MlklQ9D2Y4 472 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Tlr9Q9EQU3 1032 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Krt27Q9Z320 448 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Myh11O08638 1972 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Abcb11Q9QY30 1321 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Apol11aE9PZG0 334 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Cbfa2t2O70374 594 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Irf8P23611 424 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 RcvrnP34057 202 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Shroom1Q5SX79 823 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Taf5Q8C092 801 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Ephb1Q8CBF3 984 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Polr2bQ8CFI7 1174 aaKnown RBP12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Mageb3Q9D2H4 330 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Rnf225Q9D7D1 332 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Gm3424L7N298 263 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Gm8246M0QWX9 263 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Dhx15O35286 795 aaKnown RBP12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Mtco1P00397 514 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Tmem65Q4VAE3 234 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Tdrd5Q5VCS6 1040 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Cnot7Q60809 285 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Foxn1Q61575 648 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Cabs1Q8C633 391 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Havcr2Q8VIM0 281 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 1700129C05RikQ9CQ77 218 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Nup50Q9JIH2 466 aaKnown RBP12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Cyp39a1Q9JKJ9 470 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Kifc1Q9QWT9 674 aa12.05□□□□□ -0.48
Herc4-201ENSMUST00000020258 Scgb2b21A0A087WQA9 112 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Fam171a2A2A699 822 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 TazI7HJS2 263 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 SfnO70456 248 aaKnown RBP12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Ca8P28651 291 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Cav1P49817 178 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Erbb2P70424 1256 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Neurl1bQ0MW30 546 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Pi4k2aQ2TBE6 479 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Gpd2Q64521 727 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 LnpkQ7TQ95 425 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Atp6v0d2Q80SY3 350 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Gpr150Q8BL07 427 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Stau2Q8CJ67 570 aaKnown RBP12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Arfip2Q8K221 341 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Alg9Q8VDI9 611 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Rab11fip1Q9D620 645 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Ptgdr2Q9Z2J6 382 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Scn11aQ9R053 1765 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Zfp94E9Q6Y4 486 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Zfp212G3X8R7 492 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Sptlc1O35704 473 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Clcn3P51791 818 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 NrlP54846 237 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Edem3Q2HXL6 931 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Pbxip1Q3TVI8 727 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Lyve1Q8BHC0 318 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Trpa1Q8BLA8 1125 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 MyripQ8K3I4 856 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Rpp40Q8R1F9 363 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Ubxn2aQ99KJ0 258 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Nt5c3aQ9D020 331 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Kif13bA0A286YCV9 1847 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Mmp13P33435 472 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 PrkcbP68404 671 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Caprin2Q05A80 1031 aaKnown RBP12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Orc2Q60862 576 aaKnown RBP12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 CpQ61147 1061 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Creb3l2Q8BH52 521 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Lonp1Q8CGK3 949 aaKnown RBP12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Sfmbt1Q9JMD1 863 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Clec4aQ9QZ15 238 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 Col22a1E9Q7P1 1613 aa12.04□□□□□ -0.48
Herc4-201ENSMUST00000020258 FAM186AQ9D9R9 1790 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Ildr2B5TVM2 661 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Cd70O55237 195 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Lmnb1P14733 588 aaKnown RBP12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Serpinh1P19324 417 aaKnown RBP12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Fbln2P37889 1221 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 SftpdP50404 374 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Uchl4P58321 233 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Msx2Q03358 267 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Znf219Q6IQX8 726 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Senp7Q8BUH8 1037 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Clip4Q8CI96 704 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Tsc1Q9EP53 1161 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Raph1F2Z3U3 1266 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 GmpsQ3THK7 693 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Otud5Q3U2S4 566 aa12.03□□□□□ -0.48
Herc4-201ENSMUST00000020258 Ppp4r3cQ3V0Y1 813 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms