RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 YCR090CP25654 182 aaKnown RBP0.13□□□□□ -2.39
snR54snR54 UBC8P28263 218 aa0.13□□□□□ -2.39
snR54snR54 AHT1P29589 182 aa0.13□□□□□ -2.39
snR54snR54 UBC12P52491 188 aa0.13□□□□□ -2.39
snR54snR54 YMR226CQ05016 267 aaKnown RBP0.13□□□□□ -2.39
snR54snR54 ARO7P32178 256 aa0.12□□□□□ -2.39
snR54snR54 BMH2P34730 273 aaKnown RBP0.12□□□□□ -2.39
snR54snR54 CBT1P36038 271 aaPredicted RBP0.12□□□□□ -2.39
snR54snR54 ALB1P47019 175 aaPredicted RBP0.12□□□□□ -2.39
snR54snR54 IRC18P47056 224 aa0.12□□□□□ -2.39
snR54snR54 GGA1Q06336 557 aa0.12□□□□□ -2.39
snR54snR54 CCW12Q12127 133 aa0.12□□□□□ -2.39
snR54snR54 MDM32Q12171 622 aa0.12□□□□□ -2.39
snR54snR54 TAR1Q8TGM6 124 aa0.12□□□□□ -2.39
snR54snR54 YAR023CD6VPM8 179 aa0.11□□□□□ -2.39
snR54snR54 PAM17P36147 197 aa0.11□□□□□ -2.39
snR54snR54 YBR242WP38331 238 aa0.11□□□□□ -2.39
snR54snR54 YMR295CQ03559 197 aa0.11□□□□□ -2.39
snR54snR54 PST2Q12335 198 aaKnown RBP0.11□□□□□ -2.39
snR54snR54 TRM5P38793 499 aa0.1□□□□□ -2.39
snR54snR54 RTR1P40084 226 aaPredicted RBP0.1□□□□□ -2.39
snR54snR54 YIL102CP40488 101 aa0.1□□□□□ -2.39
snR54snR54 SER2P42941 309 aa0.1□□□□□ -2.39
snR54snR54 YNL033WP53964 284 aa0.1□□□□□ -2.39
snR54snR54 GSP2P32836 220 aaKnown RBP0.09□□□□□ -2.4
snR54snR54 SFK1P35735 353 aa0.09□□□□□ -2.4
snR54snR54 YAR064WP39563 99 aa0.09□□□□□ -2.4
snR54snR54 YER134CP40081 178 aa0.09□□□□□ -2.4
snR54snR54 YRB1P41920 201 aaKnown RBP0.09□□□□□ -2.4
snR54snR54 CWC23P52868 283 aaPredicted RBP0.09□□□□□ -2.4
snR54snR54 VPS71Q03433 280 aa0.09□□□□□ -2.4
snR54snR54 PRP18P33411 251 aaPredicted RBP0.08□□□□□ -2.4
snR54snR54 YCR087C-AP37263 153 aa0.08□□□□□ -2.4
snR54snR54 RAD17P48581 401 aa0.08□□□□□ -2.4
snR54snR54 FIT1Q04433 528 aa0.08□□□□□ -2.4
snR54snR54 DYN3Q04949 312 aa0.08□□□□□ -2.4
snR54snR54 YOL014WQ08110 124 aa0.08□□□□□ -2.4
snR54snR54 NHP6BP11633 99 aaKnown RBP0.07□□□□□ -2.4
snR54snR54 STE18P18852 110 aa0.07□□□□□ -2.4
snR54snR54 MTW1P39731 289 aa0.07□□□□□ -2.4
snR54snR54 OTU1P43558 301 aa0.07□□□□□ -2.4
snR54snR54 SKI6P46948 246 aaPredicted RBP0.07□□□□□ -2.4
snR54snR54 SED1Q01589 338 aa0.07□□□□□ -2.4
snR54snR54 SHH3Q04487 196 aa0.07□□□□□ -2.4
snR54snR54 TIR1P10863 254 aa0.06□□□□□ -2.4
snR54snR54 YPK2P18961 677 aa0.06□□□□□ -2.4
snR54snR54 CNB1P25296 175 aa0.06□□□□□ -2.4
snR54snR54 MGT1P26188 188 aa0.06□□□□□ -2.4
snR54snR54 MAK5P38112 773 aaPredicted RBP0.06□□□□□ -2.4
snR54snR54 AIM2P39721 246 aa0.06□□□□□ -2.4
snR54snR54 ARP3P47117 449 aaKnown RBP0.06□□□□□ -2.4
snR54snR54 YMR253CQ04835 414 aa0.06□□□□□ -2.4
snR54snR54 FYV12Q08559 129 aa0.06□□□□□ -2.4
snR54snR54 GET4Q12125 312 aa0.06□□□□□ -2.4
snR54snR54 MBF1O14467 151 aaKnown RBP0.05□□□□□ -2.4
snR54snR54 CDC33P07260 213 aaKnown RBP0.05□□□□□ -2.4
snR54snR54 STF2P16965 84 aa0.05□□□□□ -2.4
snR54snR54 NOP19P53317 196 aaPredicted RBP0.05□□□□□ -2.4
snR54snR54 NAT3Q06504 195 aa0.05□□□□□ -2.4
snR54snR54 YML100W-AQ8TGT0 57 aa0.05□□□□□ -2.4
snR54snR54 RIF1P29539 1916 aa0.05□□□□□ -2.4
snR54snR54 TAF14P35189 244 aa0.04□□□□□ -2.4
snR54snR54 CUP9P41817 306 aa0.04□□□□□ -2.4
snR54snR54 RRP17Q04031 235 aaPredicted RBP0.04□□□□□ -2.4
snR54snR54 FUS2Q05670 677 aa0.04□□□□□ -2.4
snR54snR54 SNF4P12904 322 aa0.03□□□□□ -2.4
snR54snR54 COQ1P18900 473 aa0.03□□□□□ -2.4
snR54snR54 YCR023CP25351 611 aa0.03□□□□□ -2.4
snR54snR54 ETR1P38071 380 aa0.03□□□□□ -2.4
snR54snR54 MPM1P40364 252 aa0.03□□□□□ -2.4
snR54snR54 DCV1P43595 202 aa0.03□□□□□ -2.4
snR54snR54 YJR111CP47148 283 aaKnown RBP0.03□□□□□ -2.4
snR54snR54 IDP1P21954 428 aaKnown RBP0.02□□□□□ -2.41
snR54snR54 IKI1P38874 309 aa0.02□□□□□ -2.41
snR54snR54 PDS1P40316 373 aaPredicted RBP0.02□□□□□ -2.41
snR54snR54 RFC4P40339 323 aaKnown RBP0.02□□□□□ -2.41
snR54snR54 YGL235WP53071 178 aa0.02□□□□□ -2.41
snR54snR54 ABP140Q08641 628 aaKnown RBP0.02□□□□□ -2.41
snR54snR54 NCB2Q92317 146 aa0.02□□□□□ -2.41
snR54snR54 SPC25P40014 221 aa0.01□□□□□ -2.41
snR54snR54 GCN20P43535 752 aaKnown RBP0.01□□□□□ -2.41
snR54snR54 RFA3P26755 122 aaKnown RBP0□□□□□ -2.41
snR54snR54 ASF2P32448 525 aaPredicted RBP0□□□□□ -2.41
snR54snR54 SBH2P52871 88 aa0□□□□□ -2.41
snR54snR54 ELP6Q04868 273 aa0□□□□□ -2.41
snR54snR54 ADF1Q2V2Q1 113 aa0□□□□□ -2.41
snR54snR54 ARG80P07249 177 aa-0.01□□□□□ -2.41
snR54snR54 MRS1P07266 363 aa-0.01□□□□□ -2.41
snR54snR54 YBL010CP32788 280 aa-0.01□□□□□ -2.41
snR54snR54 MSS2P40990 351 aa-0.01□□□□□ -2.41
snR54snR54 YFL019CP43576 117 aa-0.01□□□□□ -2.41
snR54snR54 GPI14P47088 403 aaKnown RBP-0.01□□□□□ -2.41
snR54snR54 PIR1Q03178 341 aa-0.01□□□□□ -2.41
snR54snR54 UPS1Q05776 175 aa-0.01□□□□□ -2.41
snR54snR54 YJR015WP47090 510 aa-0.02□□□□□ -2.41
snR54snR54 YLR036CQ07986 203 aa-0.02□□□□□ -2.41
snR54snR54 YOL013W-AP0C272 63 aaPredicted RBP-0.03□□□□□ -2.41
snR54snR54 FMP23P38231 175 aa-0.03□□□□□ -2.41
snR54snR54 YOR015WQ12169 119 aa-0.03□□□□□ -2.41
snR54snR54 NSE4P43124 402 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms