RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR41, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR41snR41 FIT1Q04433 528 aa0□□□□□ -2.41
snR41snR41 ABP140Q08641 628 aaKnown RBP0□□□□□ -2.41
snR41snR41 THP2O13539 261 aaKnown RBP-0.01□□□□□ -2.41
snR41snR41 RHO1P06780 209 aaKnown RBP-0.01□□□□□ -2.41
snR41snR41 MSN4P33749 630 aa-0.01□□□□□ -2.41
snR41snR41 VPS71Q03433 280 aa-0.01□□□□□ -2.41
snR41snR41 SHH3Q04487 196 aa-0.01□□□□□ -2.41
snR41snR41 PRM3Q08931 133 aa-0.01□□□□□ -2.41
snR41snR41 YAR023CD6VPM8 179 aa-0.02□□□□□ -2.41
snR41snR41 YPK2P18961 677 aa-0.02□□□□□ -2.41
snR41snR41 RPL24BP24000 155 aaKnown RBP-0.02□□□□□ -2.41
snR41snR41 GSP2P32836 220 aaKnown RBP-0.02□□□□□ -2.41
snR41snR41 BMH2P34730 273 aaKnown RBP-0.02□□□□□ -2.41
snR41snR41 MIC12P38341 106 aa-0.02□□□□□ -2.41
snR41snR41 YER134CP40081 178 aa-0.02□□□□□ -2.41
snR41snR41 YJR111CP47148 283 aaKnown RBP-0.02□□□□□ -2.41
snR41snR41 GGA1Q06336 557 aa-0.02□□□□□ -2.41
snR41snR41 PST2Q12335 198 aaKnown RBP-0.02□□□□□ -2.41
snR41snR41 RTC3P38804 111 aaPredicted RBP-0.03□□□□□ -2.41
snR41snR41 SER2P42941 309 aa-0.03□□□□□ -2.41
snR41snR41 SKI6P46948 246 aaPredicted RBP-0.03□□□□□ -2.41
snR41snR41 YNL033WP53964 284 aa-0.03□□□□□ -2.41
snR41snR41 YMR099CQ03161 297 aaKnown RBP-0.03□□□□□ -2.41
snR41snR41 GET4Q12125 312 aa-0.03□□□□□ -2.41
snR41snR41 HFA1P32874 2273 aa-0.03□□□□□ -2.41
snR41snR41 CNB1P25296 175 aa-0.04□□□□□ -2.42
snR41snR41 ETR1P38071 380 aa-0.04□□□□□ -2.42
snR41snR41 TRM5P38793 499 aa-0.04□□□□□ -2.42
snR41snR41 YJR015WP47090 510 aa-0.04□□□□□ -2.42
snR41snR41 JLP1Q12358 412 aa-0.04□□□□□ -2.42
snR41snR41 YKL183C-AQ3E765 70 aa-0.04□□□□□ -2.42
snR41snR41 YBR121C-AP0C5L4 52 aa-0.05□□□□□ -2.42
snR41snR41 MER1P16523 270 aa-0.05□□□□□ -2.42
snR41snR41 YCR023CP25351 611 aa-0.05□□□□□ -2.42
snR41snR41 PAM17P36147 197 aa-0.05□□□□□ -2.42
snR41snR41 ADO1P47143 340 aaKnown RBP-0.05□□□□□ -2.42
snR41snR41 TMA23Q03525 211 aa-0.05□□□□□ -2.42
snR41snR41 RRP17Q04031 235 aaPredicted RBP-0.05□□□□□ -2.42
snR41snR41 MDM32Q12171 622 aa-0.05□□□□□ -2.42
snR41snR41 YER085CP40058 173 aa-0.06□□□□□ -2.42
snR41snR41 YRB1P41920 201 aaKnown RBP-0.06□□□□□ -2.42
snR41snR41 TIR1P10863 254 aa-0.07□□□□□ -2.42
snR41snR41 SNF4P12904 322 aa-0.07□□□□□ -2.42
snR41snR41 YBL010CP32788 280 aa-0.07□□□□□ -2.42
snR41snR41 MTW1P39731 289 aa-0.07□□□□□ -2.42
snR41snR41 PDS1P40316 373 aaPredicted RBP-0.07□□□□□ -2.42
snR41snR41 MPM1P40364 252 aa-0.07□□□□□ -2.42
snR41snR41 YGL235WP53071 178 aa-0.07□□□□□ -2.42
snR41snR41 ELP6Q04868 273 aa-0.07□□□□□ -2.42
snR41snR41 MGT1P26188 188 aa-0.08□□□□□ -2.42
snR41snR41 TAF14P35189 244 aa-0.08□□□□□ -2.42
snR41snR41 AIM2P39721 246 aa-0.08□□□□□ -2.42
snR41snR41 ERG28P40030 148 aa-0.08□□□□□ -2.42
snR41snR41 ARP3P47117 449 aaKnown RBP-0.08□□□□□ -2.42
snR41snR41 IDP1P21954 428 aaKnown RBP-0.09□□□□□ -2.42
snR41snR41 HHY1P39982 102 aa-0.09□□□□□ -2.42
snR41snR41 YDC1Q02896 317 aa-0.09□□□□□ -2.42
snR41snR41 YMR253CQ04835 414 aa-0.09□□□□□ -2.42
snR41snR41 KEI1Q06346 221 aa-0.09□□□□□ -2.42
snR41snR41 NAT3Q06504 195 aa-0.09□□□□□ -2.42
snR41snR41 NCB2Q92317 146 aa-0.09□□□□□ -2.42
snR41snR41 INO80P53115 1489 aa-0.1□□□□□ -2.42
snR41snR41 YOL013W-AP0C272 63 aaPredicted RBP-0.1□□□□□ -2.43
snR41snR41 STF2P16965 84 aa-0.1□□□□□ -2.43
snR41snR41 PPA2P28239 310 aa-0.1□□□□□ -2.43
snR41snR41 YKR070WP36151 352 aaKnown RBP-0.1□□□□□ -2.43
snR41snR41 CUP9P41817 306 aa-0.1□□□□□ -2.43
snR41snR41 FUS2Q05670 677 aa-0.1□□□□□ -2.43
snR41snR41 ADF1Q2V2Q1 113 aa-0.1□□□□□ -2.43
snR41snR41 YCR001WP25347 104 aa-0.11□□□□□ -2.43
snR41snR41 YCR087C-AP37263 153 aa-0.11□□□□□ -2.43
snR41snR41 SPC25P40014 221 aa-0.11□□□□□ -2.43
snR41snR41 SBH2P52871 88 aa-0.11□□□□□ -2.43
snR41snR41 YMR315WQ04869 349 aaKnown RBP-0.11□□□□□ -2.43
snR41snR41 YOR015WQ12169 119 aa-0.11□□□□□ -2.43
snR41snR41 YHR213W-BQ8TGK1 99 aa-0.11□□□□□ -2.43
snR41snR41 YDR157WA0A023PZE8 133 aa-0.12□□□□□ -2.43
snR41snR41 MBF1O14467 151 aaKnown RBP-0.12□□□□□ -2.43
snR41snR41 YNL194CP40169 301 aa-0.12□□□□□ -2.43
snR41snR41 UPS1Q05776 175 aa-0.12□□□□□ -2.43
snR41snR41 YOL014WQ08110 124 aa-0.12□□□□□ -2.43
snR41snR41 SPS18P32572 300 aa-0.13□□□□□ -2.43
snR41snR41 YHP1Q04116 353 aa-0.13□□□□□ -2.43
snR41snR41 YMR030W-AQ3E760 96 aa-0.13□□□□□ -2.43
snR41snR41 MAK31P23059 88 aa-0.14□□□□□ -2.43
snR41snR41 ASF2P32448 525 aaPredicted RBP-0.14□□□□□ -2.43
snR41snR41 SHB17P36136 271 aaKnown RBP-0.14□□□□□ -2.43
snR41snR41 OTU1P43558 301 aa-0.14□□□□□ -2.43
snR41snR41 TDA4P47153 279 aa-0.14□□□□□ -2.43
snR41snR41 YML100W-AQ8TGT0 57 aa-0.14□□□□□ -2.43
snR41snR41 NSE4P43124 402 aa-0.15□□□□□ -2.43
snR41snR41 RAD17P48581 401 aa-0.15□□□□□ -2.43
snR41snR41 CWC23P52868 283 aaPredicted RBP-0.15□□□□□ -2.43
snR41snR41 YGL230CP53074 147 aa-0.15□□□□□ -2.43
snR41snR41 YLR036CQ07986 203 aa-0.15□□□□□ -2.43
snR41snR41 DGK1Q12382 290 aa-0.15□□□□□ -2.43
snR41snR41 NHP6BP11633 99 aaKnown RBP-0.16□□□□□ -2.44
snR41snR41 FMP23P38231 175 aa-0.16□□□□□ -2.44
snR41snR41 DAS2Q12084 232 aa-0.16□□□□□ -2.44
snR41snR41 DUR1,2P32528 1835 aaKnown RBP-0.16□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms