RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YPK2	P18961	677 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	CNB1	P25296	175 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	STP22	P25604	385 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	TAF14	P35189	244 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	YER134C	P40081	178 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	SER2	P42941	309 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	GCN20	P43535	752 aa	Known RBP	0.6	□□□□□ -2.31
YPR039W	YPR039W	YLR460C	P54007	376 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	YMR099C	Q03161	297 aa	Known RBP	0.6	□□□□□ -2.31
YPR039W	YPR039W	UPS3	Q04006	179 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	RNH202	Q05635	350 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	FUS2	Q05670	677 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	YPR013C	Q12145	317 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	COA3	Q3E7B2	85 aa		0.6	□□□□□ -2.31
YPR039W	YPR039W	MBF1	O14467	151 aa	Known RBP	0.59	□□□□□ -2.31
YPR039W	YPR039W	PHO85	P17157	305 aa		0.59	□□□□□ -2.31
YPR039W	YPR039W	RFA3	P26755	122 aa	Known RBP	0.59	□□□□□ -2.31
YPR039W	YPR039W	SKI6	P46948	246 aa	Predicted RBP	0.59	□□□□□ -2.31
YPR039W	YPR039W	SHH3	Q04487	196 aa		0.59	□□□□□ -2.31
YPR039W	YPR039W	ARG80	P07249	177 aa		0.58	□□□□□ -2.32
YPR039W	YPR039W	SFK1	P35735	353 aa		0.58	□□□□□ -2.32
YPR039W	YPR039W	ARP3	P47117	449 aa	Known RBP	0.58	□□□□□ -2.32
YPR039W	YPR039W	THG1	P53215	237 aa	Known RBP	0.58	□□□□□ -2.32
YPR039W	YPR039W	BNA7	Q04066	261 aa		0.58	□□□□□ -2.32
YPR039W	YPR039W	RUD3	Q12234	484 aa	Known RBP	0.58	□□□□□ -2.32
YPR039W	YPR039W	ARO7	P32178	256 aa		0.57	□□□□□ -2.32
YPR039W	YPR039W	PAM17	P36147	197 aa		0.57	□□□□□ -2.32
YPR039W	YPR039W	MTW1	P39731	289 aa		0.57	□□□□□ -2.32
YPR039W	YPR039W	ALB1	P47019	175 aa	Predicted RBP	0.57	□□□□□ -2.32
YPR039W	YPR039W	PGA2	P53903	129 aa		0.57	□□□□□ -2.32
YPR039W	YPR039W	DIG2	Q03373	323 aa	Known RBP	0.57	□□□□□ -2.32
YPR039W	YPR039W	YDR391C	Q04170	232 aa		0.57	□□□□□ -2.32
YPR039W	YPR039W	YOL014W	Q08110	124 aa		0.57	□□□□□ -2.32
YPR039W	YPR039W	ACC1	Q00955	2233 aa	Known RBP	0.56	□□□□□ -2.32
YPR039W	YPR039W	HTB1	P02293	131 aa	Known RBP	0.56	□□□□□ -2.32
YPR039W	YPR039W	HTB2	P02294	131 aa		0.56	□□□□□ -2.32
YPR039W	YPR039W	ASF2	P32448	525 aa	Predicted RBP	0.56	□□□□□ -2.32
YPR039W	YPR039W	GSP2	P32836	220 aa	Known RBP	0.56	□□□□□ -2.32
YPR039W	YPR039W	MRPL15	P36523	253 aa		0.56	□□□□□ -2.32
YPR039W	YPR039W	RFC4	P40339	323 aa	Known RBP	0.56	□□□□□ -2.32
YPR039W	YPR039W	YNL033W	P53964	284 aa		0.56	□□□□□ -2.32
YPR039W	YPR039W	YMR226C	Q05016	267 aa	Known RBP	0.56	□□□□□ -2.32
YPR039W	YPR039W	GIS3	Q12418	502 aa		0.56	□□□□□ -2.32
YPR039W	YPR039W	YML100W-A	Q8TGT0	57 aa		0.56	□□□□□ -2.32
YPR039W	YPR039W	MRS1	P07266	363 aa		0.55	□□□□□ -2.32
YPR039W	YPR039W	TIR1	P10863	254 aa		0.55	□□□□□ -2.32
YPR039W	YPR039W	MGT1	P26188	188 aa		0.55	□□□□□ -2.32
YPR039W	YPR039W	YJR111C	P47148	283 aa	Known RBP	0.55	□□□□□ -2.32
YPR039W	YPR039W	NOP19	P53317	196 aa	Predicted RBP	0.55	□□□□□ -2.32
YPR039W	YPR039W	MET31	Q03081	177 aa		0.55	□□□□□ -2.32
YPR039W	YPR039W	YLR031W	Q07978	186 aa		0.55	□□□□□ -2.32
YPR039W	YPR039W	YLR036C	Q07986	203 aa		0.55	□□□□□ -2.32
YPR039W	YPR039W	UBC8	P28263	218 aa		0.54	□□□□□ -2.32
YPR039W	YPR039W	CUP9	P41817	306 aa		0.54	□□□□□ -2.32
YPR039W	YPR039W	YMR253C	Q04835	414 aa		0.54	□□□□□ -2.32
YPR039W	YPR039W	NAT3	Q06504	195 aa		0.54	□□□□□ -2.32
YPR039W	YPR039W	YPR203W	Q08994	102 aa		0.54	□□□□□ -2.32
YPR039W	YPR039W	SNF4	P12904	322 aa		0.53	□□□□□ -2.32
YPR039W	YPR039W	IDP1	P21954	428 aa	Known RBP	0.53	□□□□□ -2.32
YPR039W	YPR039W	UGX2	P32772	223 aa		0.53	□□□□□ -2.32
YPR039W	YPR039W	YBR242W	P38331	238 aa		0.53	□□□□□ -2.32
YPR039W	YPR039W	TDA4	P47153	279 aa		0.53	□□□□□ -2.32
YPR039W	YPR039W	MMS2	P53152	137 aa		0.53	□□□□□ -2.32
YPR039W	YPR039W	SEN2	P16658	377 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	CBF1	P17106	351 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	YCR023C	P25351	611 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	AHT1	P29589	182 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	YHL037C	P38733	133 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	SPC25	P40014	221 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	PDS1	P40316	373 aa	Predicted RBP	0.52	□□□□□ -2.33
YPR039W	YPR039W	VPS71	Q03433	280 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	RNH1	Q04740	348 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	YMR315W	Q04869	349 aa	Known RBP	0.52	□□□□□ -2.33
YPR039W	YPR039W	GET4	Q12125	312 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	ADF1	Q2V2Q1	113 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	YCL012C	Q8J0M4	134 aa		0.52	□□□□□ -2.33
YPR039W	YPR039W	YNL184C	P53876	108 aa		0.51	□□□□□ -2.33
YPR039W	YPR039W	MRPS17	Q03246	237 aa	Predicted RBP	0.51	□□□□□ -2.33
YPR039W	YPR039W	RRP17	Q04031	235 aa	Predicted RBP	0.51	□□□□□ -2.33
YPR039W	YPR039W	TAR1	Q8TGM6	124 aa		0.51	□□□□□ -2.33
YPR039W	YPR039W	IGO2	Q9P305	131 aa		0.51	□□□□□ -2.33
YPR039W	YPR039W	MATALPHA2	P0CY08	210 aa		0.5	□□□□□ -2.33
YPR039W	YPR039W	HMLALPHA2	P0CY09	210 aa		0.5	□□□□□ -2.33
YPR039W	YPR039W	MAK5	P38112	773 aa	Predicted RBP	0.5	□□□□□ -2.33
YPR039W	YPR039W	YFL051C	P43552	160 aa		0.5	□□□□□ -2.33
YPR039W	YPR039W	YFL019C	P43576	117 aa		0.5	□□□□□ -2.33
YPR039W	YPR039W	TMA22	P47089	198 aa	Predicted RBP	0.5	□□□□□ -2.33
YPR039W	YPR039W	ABP140	Q08641	628 aa	Known RBP	0.5	□□□□□ -2.33
YPR039W	YPR039W	PST2	Q12335	198 aa	Known RBP	0.5	□□□□□ -2.33
YPR039W	YPR039W	FAS1	P07149	2051 aa	Known RBP	0.5	□□□□□ -2.33
YPR039W	YPR039W	FMP49	A0A023PZB3	126 aa		0.49	□□□□□ -2.33
YPR039W	YPR039W	RPS24A	P0CX31	135 aa	Known RBP	0.49	□□□□□ -2.33
YPR039W	YPR039W	RPS24B	P0CX32	135 aa	Known RBP	0.49	□□□□□ -2.33
YPR039W	YPR039W	STF2	P16965	84 aa		0.49	□□□□□ -2.33
YPR039W	YPR039W	FMP23	P38231	175 aa		0.49	□□□□□ -2.33
YPR039W	YPR039W	GPI14	P47088	403 aa	Known RBP	0.49	□□□□□ -2.33
YPR039W	YPR039W	YGL235W	P53071	178 aa		0.49	□□□□□ -2.33
YPR039W	YPR039W	PIR1	Q03178	341 aa		0.49	□□□□□ -2.33
YPR039W	YPR039W	FYV12	Q08559	129 aa		0.49	□□□□□ -2.33
YPR039W	YPR039W	YOR015W	Q12169	119 aa		0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 54 ms