RNA–Protein interactions for RNA: YPL234C

VMA11, Transcript of Vacuolar ATPase V0 domain subunit c', yeast

Gene VMA11, Length 495 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	YPL234C	RTC3	P38804	111 aa	Predicted RBP	7.31	□□□□□ -1.24
VMA11	YPL234C	SEC24	P40482	926 aa	Known RBP	7.31	□□□□□ -1.24
VMA11	YPL234C	RIB4	P50861	169 aa	Predicted RBP	7.31	□□□□□ -1.24
VMA11	YPL234C	YIP5	P53108	310 aa		7.31	□□□□□ -1.24
VMA11	YPL234C	HSK3	P69852	69 aa		7.31	□□□□□ -1.24
VMA11	YPL234C	LIP2	Q06005	328 aa		7.31	□□□□□ -1.24
VMA11	YPL234C	QCR9	P22289	66 aa		7.3	□□□□□ -1.24
VMA11	YPL234C	ACP1	P32463	125 aa		7.3	□□□□□ -1.24
VMA11	YPL234C	SHB17	P36136	271 aa	Known RBP	7.3	□□□□□ -1.24
VMA11	YPL234C	NOP16	P40007	231 aa	Known RBP	7.3	□□□□□ -1.24
VMA11	YPL234C	COX15	P40086	486 aa		7.3	□□□□□ -1.24
VMA11	YPL234C	LSM8	P47093	109 aa	Known RBP	7.3	□□□□□ -1.24
VMA11	YPL234C	YGR050C	P53231	118 aa		7.3	□□□□□ -1.24
VMA11	YPL234C	YAP1802	P53309	568 aa		7.3	□□□□□ -1.24
VMA11	YPL234C	CTR3	Q06686	241 aa		7.3	□□□□□ -1.24
VMA11	YPL234C	RIP1	P08067	215 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	FRS1	P15624	595 aa	Known RBP	7.29	□□□□□ -1.24
VMA11	YPL234C	FCY2	P17064	533 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	ALK2	P32789	676 aa	Predicted RBP	7.29	□□□□□ -1.24
VMA11	YPL234C	YKL107W	P34251	309 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	YNK1	P36010	153 aa	Known RBP	7.29	□□□□□ -1.24
VMA11	YPL234C	CDS1	P38221	457 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	YHR138C	P38841	114 aa	Predicted RBP	7.29	□□□□□ -1.24
VMA11	YPL234C	YEL057C	P39983	233 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	UBC13	P52490	153 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	WSC2	P53832	503 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	FYV6	P53913	173 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	RNH203	Q12338	110 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	BOL1	Q3E793	110 aa		7.29	□□□□□ -1.24
VMA11	YPL234C	HEM4	P06174	275 aa		7.28	□□□□□ -1.24
VMA11	YPL234C	URA5	P13298	226 aa	Known RBP	7.28	□□□□□ -1.24
VMA11	YPL234C	ROX3	P25046	220 aa		7.28	□□□□□ -1.24
VMA11	YPL234C	SSS1	P35179	80 aa		7.28	□□□□□ -1.24
VMA11	YPL234C	YBR013C	P38215	129 aa		7.28	□□□□□ -1.24
VMA11	YPL234C	YGR269W	P40326	108 aa		7.28	□□□□□ -1.24
VMA11	YPL234C	YGL114W	P53134	725 aa		7.28	□□□□□ -1.24
VMA11	YPL234C	SMM1	P53720	384 aa	Known RBP	7.28	□□□□□ -1.24
VMA11	YPL234C	LPP1	Q04396	274 aa		7.28	□□□□□ -1.24
VMA11	YPL234C	LSO2	Q3E772	92 aa	Known RBP	7.28	□□□□□ -1.24
VMA11	YPL234C	RPS25B	P0C0T4	108 aa	Known RBP	7.27	□□□□□ -1.25
VMA11	YPL234C	MIA40	P36046	403 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	YMR262W	P38430	313 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	HSP10	P38910	106 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	SUR2	P38992	349 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	ARP3	P47117	449 aa	Known RBP	7.27	□□□□□ -1.25
VMA11	YPL234C	AVO2	Q04749	426 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	DAL4	Q04895	635 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	CRR1	Q05790	422 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	YPR063C	Q12160	140 aa		7.27	□□□□□ -1.25
VMA11	YPL234C	FOL3	Q12676	427 aa	Predicted RBP	7.27	□□□□□ -1.25
VMA11	YPL234C	RPS25A	Q3E792	108 aa	Predicted RBP	7.27	□□□□□ -1.25
VMA11	YPL234C	YMR31	P19955	123 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	MOH1	P38191	138 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	QDR3	P38227	689 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	TAX4	P47030	604 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	RPN14	P53196	417 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	HCH1	P53834	153 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	RFM1	Q12192	310 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	RAX2	Q12465	1220 aa		7.26	□□□□□ -1.25
VMA11	YPL234C	PET494	P07390	489 aa	Predicted RBP	7.25	□□□□□ -1.25
VMA11	YPL234C	DAL3	P32459	195 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	REC104	P33323	182 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	YOX1	P34161	385 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	YBL059W	P34224	193 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	CUE1	P38428	203 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	PTC7	P38797	343 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	YCK3	P39962	524 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	GET2	P40056	285 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	PAU5	P43575	122 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	GON7	P46984	123 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	YGL185C	P53100	379 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	ARL3	Q02804	198 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	YMR007W	Q03675	126 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	ECM18	Q04623	453 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	ERF2	Q06551	359 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	ARR3	Q06598	404 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	YOL024W	Q08172	172 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	USV1	Q12132	391 aa		7.25	□□□□□ -1.25
VMA11	YPL234C	VPS63	O13549	108 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	RPL9A	P05738	191 aa	Known RBP	7.24	□□□□□ -1.25
VMA11	YPL234C	PAU19	P0CE85	124 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	PAU21	P0CE86	164 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	PAU22	P0CE87	164 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	NHP6A	P11632	93 aa	Known RBP	7.24	□□□□□ -1.25
VMA11	YPL234C	PAU3	P25610	124 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	GAR1	P28007	205 aa	Known RBP	7.24	□□□□□ -1.25
VMA11	YPL234C	APS2	Q00381	147 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	ACS1	Q01574	713 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	YDR114C	Q04597	100 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	FRQ1	Q06389	190 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	PML1	Q07930	204 aa	Predicted RBP	7.24	□□□□□ -1.25
VMA11	YPL234C	ERV2	Q12284	196 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	YOP1	Q12402	180 aa		7.24	□□□□□ -1.25
VMA11	YPL234C	RPS23A	P0CX29	145 aa	Known RBP	7.23	□□□□□ -1.25
VMA11	YPL234C	RPS23B	P0CX30	145 aa		7.23	□□□□□ -1.25
VMA11	YPL234C	AFR1	P33304	620 aa		7.23	□□□□□ -1.25
VMA11	YPL234C	CPR5	P35176	225 aa		7.23	□□□□□ -1.25
VMA11	YPL234C	IMD2	P38697	523 aa	Known RBP	7.23	□□□□□ -1.25
VMA11	YPL234C	LOC1	P43586	204 aa	Predicted RBP	7.23	□□□□□ -1.25
VMA11	YPL234C	DAD3	P69850	94 aa		7.23	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms