RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C ACS1Q01574 713 aa7.37□□□□□ -1.23
RPD3YNL330C RIM9Q04734 239 aa7.37□□□□□ -1.23
RPD3YNL330C HRD1Q08109 551 aa7.37□□□□□ -1.23
RPD3YNL330C SWT1Q12104 458 aa7.37□□□□□ -1.23
RPD3YNL330C RPL7BQ12213 244 aaKnown RBP7.37□□□□□ -1.23
RPD3YNL330C DCN1Q12395 269 aa7.37□□□□□ -1.23
RPD3YNL330C YOP1Q12402 180 aa7.37□□□□□ -1.23
RPD3YNL330C YOR192C-CQ3E736 78 aa7.37□□□□□ -1.23
RPD3YNL330C YBR255C-AQ3E776 120 aa7.37□□□□□ -1.23
RPD3YNL330C DAL82P21705 255 aa7.36□□□□□ -1.23
RPD3YNL330C MRPL39P36533 70 aa7.36□□□□□ -1.23
RPD3YNL330C PTC7P38797 343 aa7.36□□□□□ -1.23
RPD3YNL330C OST1P41543 476 aaKnown RBP7.36□□□□□ -1.23
RPD3YNL330C GEP7P53171 287 aa7.36□□□□□ -1.23
RPD3YNL330C YOL118CQ08259 102 aa7.36□□□□□ -1.23
RPD3YNL330C NCE102Q12207 173 aaRIP-Chip data7.36□□□□□ -1.23not detected
RPD3YNL330C ERV2Q12284 196 aa7.36□□□□□ -1.23
RPD3YNL330C COA6Q3E846 104 aa7.36□□□□□ -1.23
RPD3YNL330C DAL3P32459 195 aa7.35□□□□□ -1.23
RPD3YNL330C SCM4P32564 187 aa7.35□□□□□ -1.23
RPD3YNL330C IRC22P40006 225 aa7.35□□□□□ -1.23
RPD3YNL330C COX15P40086 486 aa7.35□□□□□ -1.23
RPD3YNL330C PCL7P40186 285 aa7.35□□□□□ -1.23
RPD3YNL330C YIL077CP40508 320 aa7.35□□□□□ -1.23
RPD3YNL330C ATG27P46989 271 aa7.35□□□□□ -1.23
RPD3YNL330C YGR050CP53231 118 aa7.35□□□□□ -1.23
RPD3YNL330C CYT2Q00873 224 aa7.35□□□□□ -1.23
RPD3YNL330C DFG5Q05031 458 aa7.35□□□□□ -1.23
RPD3YNL330C ERF2Q06551 359 aa7.35□□□□□ -1.23
RPD3YNL330C Q0144Q9ZZW2 109 aa7.35□□□□□ -1.23
RPD3YNL330C ACC1Q00955 2233 aaKnown RBP7.34□□□□□ -1.23
RPD3YNL330C SEC16P48415 2195 aaKnown RBP7.34□□□□□ -1.23
RPD3YNL330C YKL107WP34251 309 aa7.34□□□□□ -1.23
RPD3YNL330C RTC3P38804 111 aaPredicted RBP7.34□□□□□ -1.23
RPD3YNL330C YGR269WP40326 108 aa7.34□□□□□ -1.23
RPD3YNL330C EGT2P42835 1041 aa7.34□□□□□ -1.23
RPD3YNL330C APS2Q00381 147 aa7.34□□□□□ -1.23
RPD3YNL330C YDR209CQ03480 137 aa7.34□□□□□ -1.23
RPD3YNL330C RCE1Q03530 315 aa7.34□□□□□ -1.23
RPD3YNL330C RIP1P08067 215 aa7.33□□□□□ -1.24
RPD3YNL330C FCY2P17064 533 aa7.33□□□□□ -1.24
RPD3YNL330C MRPL44P19956 98 aa7.33□□□□□ -1.24
RPD3YNL330C PRE9P23638 258 aaKnown RBP7.33□□□□□ -1.24
RPD3YNL330C COQ3P27680 312 aa7.33□□□□□ -1.24
RPD3YNL330C PIG2P40187 538 aa7.33□□□□□ -1.24
RPD3YNL330C TAF4P50105 388 aa7.33□□□□□ -1.24
RPD3YNL330C YNR040WP53736 256 aa7.33□□□□□ -1.24
RPD3YNL330C DAD3P69850 94 aa7.33□□□□□ -1.24
RPD3YNL330C SEN15Q04675 128 aa7.33□□□□□ -1.24
RPD3YNL330C DAL4Q04895 635 aa7.33□□□□□ -1.24
RPD3YNL330C RRS1Q08746 203 aaKnown RBP7.33□□□□□ -1.24
RPD3YNL330C BOL1Q3E793 110 aa7.33□□□□□ -1.24
RPD3YNL330C RPS25BP0C0T4 108 aaKnown RBP7.32□□□□□ -1.24
RPD3YNL330C BGL2P15703 313 aaKnown RBP7.32□□□□□ -1.24
RPD3YNL330C AFR1P33304 620 aa7.32□□□□□ -1.24
RPD3YNL330C MRPS5P33759 307 aa7.32□□□□□ -1.24
RPD3YNL330C YHR138CP38841 114 aaPredicted RBP7.32□□□□□ -1.24
RPD3YNL330C AIM24P47127 394 aa7.32□□□□□ -1.24
RPD3YNL330C YPL067CQ02754 198 aa7.32□□□□□ -1.24
RPD3YNL330C YDC1Q02896 317 aa7.32□□□□□ -1.24
RPD3YNL330C FIT3Q08907 204 aa7.32□□□□□ -1.24
RPD3YNL330C RPS25AQ3E792 108 aaPredicted RBP7.32□□□□□ -1.24
RPD3YNL330C RPS22AP0C0W1 130 aaKnown RBP7.31□□□□□ -1.24
RPD3YNL330C URA5P13298 226 aaKnown RBP7.31□□□□□ -1.24
RPD3YNL330C YBL059WP34224 193 aa7.31□□□□□ -1.24
RPD3YNL330C MIA40P36046 403 aa7.31□□□□□ -1.24
RPD3YNL330C QDR3P38227 689 aa7.31□□□□□ -1.24
RPD3YNL330C NSA2P40078 261 aaKnown RBP7.31□□□□□ -1.24
RPD3YNL330C LOC1P43586 204 aaPredicted RBP7.31□□□□□ -1.24
RPD3YNL330C ARP3P47117 449 aaKnown RBP7.31□□□□□ -1.24
RPD3YNL330C XPT1P47165 209 aa7.31□□□□□ -1.24
RPD3YNL330C YIP5P53108 310 aa7.31□□□□□ -1.24
RPD3YNL330C LST7P53237 242 aa7.31□□□□□ -1.24
RPD3YNL330C HCH1P53834 153 aa7.31□□□□□ -1.24
RPD3YNL330C ATG4P53867 494 aa7.31□□□□□ -1.24
RPD3YNL330C LIP2Q06005 328 aa7.31□□□□□ -1.24
RPD3YNL330C FRQ1Q06389 190 aa7.31□□□□□ -1.24
RPD3YNL330C YOR352WQ08816 343 aa7.31□□□□□ -1.24
RPD3YNL330C LAS17Q12446 633 aa7.31□□□□□ -1.24
RPD3YNL330C TMA17Q12513 150 aa7.31□□□□□ -1.24
RPD3YNL330C FMP49A0A023PZB3 126 aa7.3□□□□□ -1.24
RPD3YNL330C ROX3P25046 220 aa7.3□□□□□ -1.24
RPD3YNL330C YKL075CP36083 450 aa7.3□□□□□ -1.24
RPD3YNL330C MTC6P38849 526 aa7.3□□□□□ -1.24
RPD3YNL330C YER084WP40057 128 aa7.3□□□□□ -1.24
RPD3YNL330C WSC2P53832 503 aa7.3□□□□□ -1.24
RPD3YNL330C HSK3P69852 69 aa7.3□□□□□ -1.24
RPD3YNL330C RAF1Q06891 181 aa7.3□□□□□ -1.24
RPD3YNL330C YNR034W-AQ3E841 98 aa7.3□□□□□ -1.24
RPD3YNL330C YPR117WQ06116 2489 aa7.3□□□□□ -1.24
RPD3YNL330C VPS63O13549 108 aa7.29□□□□□ -1.24
RPD3YNL330C RPL35AP0CX84 120 aaKnown RBP7.29□□□□□ -1.24
RPD3YNL330C RPL35BP0CX85 120 aaKnown RBP7.29□□□□□ -1.24
RPD3YNL330C YMR31P19955 123 aa7.29□□□□□ -1.24
RPD3YNL330C SEC62P21825 274 aa7.29□□□□□ -1.24
RPD3YNL330C PSD1P39006 500 aa7.29□□□□□ -1.24
RPD3YNL330C YMR007WQ03675 126 aa7.29□□□□□ -1.24
RPD3YNL330C ARR3Q06598 404 aa7.29□□□□□ -1.24
RPD3YNL330C USV1Q12132 391 aa7.29□□□□□ -1.24
RPD3YNL330C YPS3Q12303 508 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms