RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YSC83	P32792	385 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	SDS24	P38314	527 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	YIR007W	P40566	764 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	SAS2	P40963	338 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	TAM41	P53230	385 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	HLR1	Q04429	423 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	RRG8	Q06109	277 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	YOR376W	Q08900	122 aa		6.27	□□□□□ -1.41
MSB3	YNL293W	RAD6	P06104	172 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	UBC5	P15732	148 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	MRPL20	P22354	195 aa	Predicted RBP	6.26	□□□□□ -1.41
MSB3	YNL293W	ERG8	P24521	451 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	RPS20	P38701	121 aa	Known RBP	6.26	□□□□□ -1.41
MSB3	YNL293W	YER134C	P40081	178 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	RPN11	P43588	306 aa	Known RBP	6.26	□□□□□ -1.41
MSB3	YNL293W	YDL186W	P48568	277 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	ALG13	P53178	202 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	CAB4	P53332	305 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	ENB1	Q08299	606 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
MSB3	YNL293W	YOR029W	Q12243	111 aa		6.26	□□□□□ -1.41
MSB3	YNL293W	SOD2	P00447	233 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	INO2	P26798	304 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	NUD1	P32336	851 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	PAU2	P32612	120 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	CMC1	P36064	111 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	RPB11	P38902	120 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	YJL213W	P40896	331 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	PRY1	P47032	299 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	FRK1	Q03002	865 aa	Predicted RBP	6.25	□□□□□ -1.41
MSB3	YNL293W	SNO4	Q04902	237 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	XYL2	Q07993	356 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	HSP32	Q08992	237 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	YPQ1	Q12010	308 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	YPL229W	Q99395	206 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	SEC11	P15367	167 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	MKK2	P32491	506 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	SLM6	P38343	150 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	YNL194C	P40169	301 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	YJR124C	P47159	448 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	MRPL51	Q06090	140 aa	Predicted RBP	6.25	□□□□□ -1.41
MSB3	YNL293W	HSP33	Q08914	237 aa	Known RBP	6.25	□□□□□ -1.41
MSB3	YNL293W	UTP23	Q12339	254 aa	Known RBP	6.25	□□□□□ -1.41
MSB3	YNL293W	JID1	Q12350	301 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	PCL9	Q12477	304 aa		6.25	□□□□□ -1.41
MSB3	YNL293W	YAR066W	P0CX18	203 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	YHR214W	P0CX19	203 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	RPL12A	P0CX53	165 aa	Known RBP	6.24	□□□□□ -1.41
MSB3	YNL293W	RPL12B	P0CX54	165 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	RFA3	P26755	122 aa	Known RBP	6.24	□□□□□ -1.41
MSB3	YNL293W	MAC1	P35192	417 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	OST2	P46964	130 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	EMC4	P53073	190 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	YGR039W	P53225	103 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	IZH1	Q03419	316 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	BLS1	Q06071	122 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	Q0010	Q9ZZX9	128 aa		6.24	□□□□□ -1.41
MSB3	YNL293W	UBR2	Q07963	1872 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	MRS1	P07266	363 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	CDC26	P14724	124 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YSR3	P23501	404 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	SRP21	P32342	167 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	KTI12	P34253	313 aa	Known RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	RPL14A	P36105	138 aa	Known RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	FLO5	P38894	1075 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YIP5	P53108	310 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	WSC2	P53832	503 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YNL143C	P53908	130 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YML079W	Q03629	201 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	ELP6	Q04868	273 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YDR344C	Q05510	147 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	NMA1	Q06178	401 aa	Known RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	DGA1	Q08650	418 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	ATO3	Q12359	275 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YKL183C-A	Q3E765	70 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	URA5	P13298	226 aa	Known RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	YJU3	P28321	313 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	SGE1	P33335	543 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YKR070W	P36151	352 aa	Known RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	VBA2	P38358	474 aa	Known RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	FYV4	P38783	130 aa	Predicted RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	TEM1	P38987	245 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YJL118W	P47022	219 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	BOL2	P53082	120 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	BET5	Q03630	159 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	YPR098C	Q06089	161 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	POC4	Q12245	148 aa	Predicted RBP	6.23	□□□□□ -1.41
MSB3	YNL293W	ZPS1	Q12512	249 aa		6.23	□□□□□ -1.41
MSB3	YNL293W	TRX3	P25372	127 aa		6.22	□□□□□ -1.41
MSB3	YNL293W	SHB17	P36136	271 aa	Known RBP	6.22	□□□□□ -1.41
MSB3	YNL293W	MID1	P41821	548 aa		6.22	□□□□□ -1.41
MSB3	YNL293W	CDH1	P53197	566 aa		6.22	□□□□□ -1.41
MSB3	YNL293W	YMR178W	Q03219	274 aa	Known RBP	6.22	□□□□□ -1.41
MSB3	YNL293W	ATG40	Q99325	256 aa		6.22	□□□□□ -1.41
MSB3	YNL293W	HKR1	P41809	1802 aa		6.22	□□□□□ -1.41
MSB3	YNL293W	VMA11	P32842	164 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	YBR292C	P38357	123 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	YEA4	P40004	342 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	SDP1	P40479	209 aa		6.21	□□□□□ -1.41
MSB3	YNL293W	CWP2	P43497	92 aa		6.21	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms