RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	NSA1	P53136	463 aa	Predicted RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	CRH1	P53301	507 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	HHT1	P61830	136 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	TIM11	P81449	96 aa	Predicted RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	YDR248C	Q03786	193 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	ANT1	Q06497	328 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	MRX9	Q07349	420 aa	Known RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	SCP1	Q08873	200 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	FEX2	Q08991	375 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	ATP14	Q12349	124 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	CDC28	P00546	298 aa	Known RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	TPI1	P00942	248 aa	Known RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	CBP6	P07253	162 aa	Predicted RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	QCR2	P07257	368 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	AGA2	P32781	87 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	EMP24	P32803	203 aa	Known RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	MRPL39	P36533	70 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	GNA1	P43577	159 aa	Predicted RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	YJR111C	P47148	283 aa	Known RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	ALG9	P53868	555 aa	Known RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	EOS1	P53938	366 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	RSM10	Q03201	203 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	CAB5	Q03941	241 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	NOC4	Q06512	552 aa	Predicted RBP	2.9	□□□□□ -1.95
TPM1	YNL079C	TFC7	Q12415	435 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	UBA3	Q99344	299 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	Q0144	Q9ZZW2	109 aa		2.9	□□□□□ -1.95
TPM1	YNL079C	FAS1	P07149	2051 aa	Known RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	FUS3	P16892	353 aa	Known RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	PEX4	P29340	183 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	PDC2	P32896	925 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	SRY1	P36007	326 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	DAD2	P36162	133 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	FIG1	P38224	298 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	COS8	P38723	381 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	ASP1	P38986	381 aa	Predicted RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	GCV3	P39726	170 aa	Predicted RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	SSO2	P39926	295 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	OXA1	P39952	402 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	YIR035C	P40579	254 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	GLR1	P41921	483 aa	Known RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	UFD1	P53044	361 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	PNC1	P53184	216 aa	Known RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	ACT1	P60010	375 aa	Known RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	THI74	Q04083	370 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	RFU1	Q08003	200 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	FCY22	Q12119	530 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	USB1	Q12208	290 aa	Known RBP	2.89	□□□□□ -1.95
TPM1	YNL079C	YDL180W	Q12301	547 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	MED4	Q12343	284 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	HUT1	Q12520	339 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	IRA2	P19158	3079 aa		2.89	□□□□□ -1.95
TPM1	YNL079C	TEL1	P38110	2787 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	HFA1	P32874	2273 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	SSA3	P09435	649 aa	Known RBP	2.88	□□□□□ -1.95
TPM1	YNL079C	YLL053C	P0CD98	152 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	MIR1	P23641	311 aa	Known RBP	2.88	□□□□□ -1.95
TPM1	YNL079C	YCR101C	P25607	182 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	OCH1	P31755	480 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	MRPS5	P33759	307 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	MCH2	P36032	473 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	LSM12	P38828	187 aa	Known RBP	2.88	□□□□□ -1.95
TPM1	YNL079C	RPL13B	P40212	199 aa	Known RBP	2.88	□□□□□ -1.95
TPM1	YNL079C	YHC3	P47040	408 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	TSA2	Q04120	196 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	RRT7	Q07829	113 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	YOR186W	Q08560	144 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	YCT1	Q12235	531 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	RPL13A	Q12690	199 aa	Predicted RBP	2.88	□□□□□ -1.95
TPM1	YNL079C	YLR146W-A	Q2V2P1	62 aa		2.88	□□□□□ -1.95
TPM1	YNL079C	REP2	P03872	296 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	RPL25	P04456	142 aa	Known RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	UBI4	P0CG63	381 aa	Known RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	RPL40A	P0CH08	128 aa	Known RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	RPL40B	P0CH09	128 aa	Known RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	SAG1	P20840	650 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	CBT1	P36038	271 aa	Predicted RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	SWD2	P36104	329 aa	Predicted RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	ADH5	P38113	351 aa	Known RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	POP2	P39008	433 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	CCS1	P40202	249 aa	Known RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	AGX1	P43567	385 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	SNN1	P48232	102 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	SOL1	P50278	321 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	HAL1	Q01766	294 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	EST3	Q03096	181 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	RCE1	Q03530	315 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	YDR391C	Q04170	232 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	YDR286C	Q05530	114 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	BER1	Q06688	274 aa	Known RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	YOL024W	Q08172	172 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	FIT3	Q08907	204 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	FCF2	Q12035	217 aa	Predicted RBP	2.87	□□□□□ -1.95
TPM1	YNL079C	YLR365W	Q7LIF2	110 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	YHR213W-A	Q8TGT4	77 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	IRA1	P18963	3092 aa		2.87	□□□□□ -1.95
TPM1	YNL079C	ZRC1	P20107	442 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	CNB1	P25296	175 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	ATG15	P25641	520 aa		2.86	□□□□□ -1.95
TPM1	YNL079C	LDS1	P31379	325 aa		2.86	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms