RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C CPD1P53314 239 aa1.28□□□□□ -2.2
SFB2YNL049C YNR066CP53752 436 aa1.28□□□□□ -2.2
SFB2YNL049C ACT1P60010 375 aaKnown RBP1.28□□□□□ -2.2
SFB2YNL049C TPS1Q00764 495 aaKnown RBP1.28□□□□□ -2.2
SFB2YNL049C YMR099CQ03161 297 aaKnown RBP1.28□□□□□ -2.2
SFB2YNL049C FMN1Q03778 218 aa1.28□□□□□ -2.2
SFB2YNL049C CSN9Q03981 162 aa1.28□□□□□ -2.2
SFB2YNL049C PEX30Q06169 523 aa1.28□□□□□ -2.2
SFB2YNL049C MHR1Q06630 226 aa1.28□□□□□ -2.2
SFB2YNL049C DTD1Q07648 150 aaKnown RBP1.28□□□□□ -2.2
SFB2YNL049C DGK1Q12382 290 aa1.28□□□□□ -2.2
SFB2YNL049C COX9P07255 59 aa1.27□□□□□ -2.21
SFB2YNL049C CUP2P15315 225 aa1.27□□□□□ -2.21
SFB2YNL049C POF1P25576 258 aa1.27□□□□□ -2.21
SFB2YNL049C PEX4P29340 183 aa1.27□□□□□ -2.21
SFB2YNL049C TFC1P32367 649 aa1.27□□□□□ -2.21
SFB2YNL049C MRPL6P32904 214 aa1.27□□□□□ -2.21
SFB2YNL049C MRPL27P36526 146 aaPredicted RBP1.27□□□□□ -2.21
SFB2YNL049C SMP1P38128 452 aa1.27□□□□□ -2.21
SFB2YNL049C PRS2P38620 318 aaKnown RBP1.27□□□□□ -2.21
SFB2YNL049C SMX2P40204 77 aaKnown RBP1.27□□□□□ -2.21
SFB2YNL049C PRE5P40302 234 aaKnown RBP1.27□□□□□ -2.21
SFB2YNL049C YIA6P40556 373 aa1.27□□□□□ -2.21
SFB2YNL049C YFR054CP43622 192 aa1.27□□□□□ -2.21
SFB2YNL049C DIE2P50076 525 aa1.27□□□□□ -2.21
SFB2YNL049C ORM1P53224 222 aa1.27□□□□□ -2.21
SFB2YNL049C YGR219WP53307 113 aa1.27□□□□□ -2.21
SFB2YNL049C OST6Q03723 332 aa1.27□□□□□ -2.21
SFB2YNL049C YLR053CQ12026 108 aa1.27□□□□□ -2.21
SFB2YNL049C BTS1Q12051 335 aa1.27□□□□□ -2.21
SFB2YNL049C YOL162WP0CF19 215 aa1.27□□□□□ -2.21
SFB2YNL049C YCR025CP25352 136 aa1.27□□□□□ -2.21
SFB2YNL049C ARO4P32449 370 aaKnown RBP1.27□□□□□ -2.21
SFB2YNL049C PDS1P40316 373 aaPredicted RBP1.27□□□□□ -2.21
SFB2YNL049C BMT5P40493 336 aa1.27□□□□□ -2.21
SFB2YNL049C FIP1P45976 327 aa1.27□□□□□ -2.21
SFB2YNL049C TIM21P53220 239 aa1.27□□□□□ -2.21
SFB2YNL049C COS6P53344 381 aa1.27□□□□□ -2.21
SFB2YNL049C YLR152CP54072 576 aa1.27□□□□□ -2.21
SFB2YNL049C MRPS16Q02608 121 aa1.27□□□□□ -2.21
SFB2YNL049C RPL21AQ02753 160 aaKnown RBP1.27□□□□□ -2.21
SFB2YNL049C DML1Q03652 475 aa1.27□□□□□ -2.21
SFB2YNL049C GRH1Q04410 372 aaKnown RBP1.27□□□□□ -2.21
SFB2YNL049C DPP1Q05521 289 aa1.27□□□□□ -2.21
SFB2YNL049C YOR292CQ08743 309 aa1.27□□□□□ -2.21
SFB2YNL049C YOR029WQ12243 111 aa1.27□□□□□ -2.21
SFB2YNL049C PCL1P24867 279 aa1.26□□□□□ -2.21
SFB2YNL049C YBR032WP38223 100 aa1.26□□□□□ -2.21
SFB2YNL049C SDS24P38314 527 aa1.26□□□□□ -2.21
SFB2YNL049C YPS5P53057 165 aa1.26□□□□□ -2.21
SFB2YNL049C TPN1P53099 579 aa1.26□□□□□ -2.21
SFB2YNL049C YMR244WQ04018 355 aa1.26□□□□□ -2.21
SFB2YNL049C GPI17Q04080 534 aa1.26□□□□□ -2.21
SFB2YNL049C TSA2Q04120 196 aa1.26□□□□□ -2.21
SFB2YNL049C GAL83Q04739 417 aa1.26□□□□□ -2.21
SFB2YNL049C RNH202Q05635 350 aa1.26□□□□□ -2.21
SFB2YNL049C NNT1Q05874 261 aa1.26□□□□□ -2.21
SFB2YNL049C TFC7Q12415 435 aa1.26□□□□□ -2.21
SFB2YNL049C ATG31Q12421 196 aa1.26□□□□□ -2.21
SFB2YNL049C YMR105W-AQ8TGS8 64 aa1.26□□□□□ -2.21
SFB2YNL049C BPH1P25356 2167 aa1.26□□□□□ -2.21
SFB2YNL049C PET494P07390 489 aaPredicted RBP1.26□□□□□ -2.21
SFB2YNL049C YHR212W-AP0CX91 67 aa1.26□□□□□ -2.21
SFB2YNL049C YMR31P19955 123 aa1.26□□□□□ -2.21
SFB2YNL049C ERG2P32352 222 aa1.26□□□□□ -2.21
SFB2YNL049C RIO2P40160 425 aaKnown RBP1.26□□□□□ -2.21
SFB2YNL049C YGL262WP53054 175 aa1.26□□□□□ -2.21
SFB2YNL049C YGR018CP53211 109 aa1.26□□□□□ -2.21
SFB2YNL049C FMP48P53233 369 aa1.26□□□□□ -2.21
SFB2YNL049C INP1Q03694 420 aa1.26□□□□□ -2.21
SFB2YNL049C UTP15Q04305 513 aaKnown RBP1.26□□□□□ -2.21
SFB2YNL049C SFH1Q06168 426 aa1.26□□□□□ -2.21
SFB2YNL049C LOA1Q06508 300 aa1.26□□□□□ -2.21
SFB2YNL049C MED4Q12343 284 aa1.26□□□□□ -2.21
SFB2YNL049C YOL085CQ99345 113 aa1.26□□□□□ -2.21
SFB2YNL049C ADH1P00330 348 aaKnown RBP1.25□□□□□ -2.21
SFB2YNL049C CDC10P25342 322 aaKnown RBP1.25□□□□□ -2.21
SFB2YNL049C IDH1P28834 360 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
SFB2YNL049C UPS2P35200 230 aa1.25□□□□□ -2.21
SFB2YNL049C MRPL17P36528 281 aa1.25□□□□□ -2.21
SFB2YNL049C FRM2P37261 193 aa1.25□□□□□ -2.21
SFB2YNL049C MBA1P38300 278 aa1.25□□□□□ -2.21
SFB2YNL049C ECM34P38728 170 aa1.25□□□□□ -2.21
SFB2YNL049C VMA22P38784 181 aa1.25□□□□□ -2.21
SFB2YNL049C RRT13P40042 185 aa1.25□□□□□ -2.21
SFB2YNL049C RGI1P40043 161 aaPredicted RBP1.25□□□□□ -2.21
SFB2YNL049C RRG9P40156 214 aa1.25□□□□□ -2.21
SFB2YNL049C HIT1P46973 164 aa1.25□□□□□ -2.21
SFB2YNL049C GON7P46984 123 aa1.25□□□□□ -2.21
SFB2YNL049C GET1P53192 235 aa1.25□□□□□ -2.21
SFB2YNL049C NRK1P53915 240 aa1.25□□□□□ -2.21
SFB2YNL049C HAL1Q01766 294 aa1.25□□□□□ -2.21
SFB2YNL049C SRL4Q03085 281 aa1.25□□□□□ -2.21
SFB2YNL049C YDR102CQ03864 110 aa1.25□□□□□ -2.21
SFB2YNL049C NOC4Q06512 552 aaPredicted RBP1.25□□□□□ -2.21
SFB2YNL049C SDO1Q07953 250 aaKnown RBP1.25□□□□□ -2.21
SFB2YNL049C YPL162CQ12042 273 aa1.25□□□□□ -2.21
SFB2YNL049C YAL067W-AQ8TGK6 75 aa1.25□□□□□ -2.21
SFB2YNL049C IFM1P25038 676 aa1.25□□□□□ -2.21
SFB2YNL049C VMA6P32366 345 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms