RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W PAU9Q3E770 120 aa3.26□□□□□ -1.89
ECM16YMR128W ARF1P11076 181 aaKnown RBP3.26□□□□□ -1.89
ECM16YMR128W LSB5P25369 354 aa3.26□□□□□ -1.89
ECM16YMR128W FEN2P25621 512 aaKnown RBP3.26□□□□□ -1.89
ECM16YMR128W OCH1P31755 480 aa3.26□□□□□ -1.89
ECM16YMR128W ELF1P36053 145 aa3.26□□□□□ -1.89
ECM16YMR128W PAC2P39937 518 aa3.26□□□□□ -1.89
ECM16YMR128W GAT2P40209 560 aa3.26□□□□□ -1.89
ECM16YMR128W CTK2P46962 323 aa3.26□□□□□ -1.89
ECM16YMR128W COQ5P49017 307 aa3.26□□□□□ -1.89
ECM16YMR128W UBC11P52492 156 aa3.26□□□□□ -1.89
ECM16YMR128W YGR126WP53274 230 aa3.26□□□□□ -1.89
ECM16YMR128W YPR147CQ06522 304 aaKnown RBP3.26□□□□□ -1.89
ECM16YMR128W PRP46Q12417 451 aaPredicted RBP3.26□□□□□ -1.89
ECM16YMR128W POM34Q12445 299 aa3.26□□□□□ -1.89
ECM16YMR128W BET2P20133 325 aa3.25□□□□□ -1.89
ECM16YMR128W RSM23Q01163 450 aa3.25□□□□□ -1.89
ECM16YMR128W IRC13Q08630 104 aa3.25□□□□□ -1.89
ECM16YMR128W MDM35O60200 86 aa3.25□□□□□ -1.89
ECM16YMR128W SCO1P23833 295 aa3.25□□□□□ -1.89
ECM16YMR128W AFG1P32317 509 aa3.25□□□□□ -1.89
ECM16YMR128W RPB7P34087 171 aa3.25□□□□□ -1.89
ECM16YMR128W YLR030WQ07967 263 aa3.25□□□□□ -1.89
ECM16YMR128W FCY22Q12119 530 aa3.25□□□□□ -1.89
ECM16YMR128W SWM1Q12379 170 aa3.25□□□□□ -1.89
ECM16YMR128W STE4P18851 423 aa3.25□□□□□ -1.89
ECM16YMR128W TRS20P38334 175 aa3.25□□□□□ -1.89
ECM16YMR128W YBR292CP38357 123 aa3.25□□□□□ -1.89
ECM16YMR128W CDC40P40968 455 aaPredicted RBP3.25□□□□□ -1.89
ECM16YMR128W NSA1P53136 463 aaPredicted RBP3.25□□□□□ -1.89
ECM16YMR128W YPL039WQ03080 316 aa3.25□□□□□ -1.89
ECM16YMR128W YHR214C-EQ8TGK0 99 aa3.25□□□□□ -1.89
ECM16YMR128W CDC28P00546 298 aaKnown RBP3.24□□□□□ -1.89
ECM16YMR128W YPT1P01123 206 aaKnown RBP3.24□□□□□ -1.89
ECM16YMR128W CKA1P15790 372 aa3.24□□□□□ -1.89
ECM16YMR128W AIM17P23180 465 aaKnown RBP3.24□□□□□ -1.89
ECM16YMR128W YBR090CP38253 122 aa3.24□□□□□ -1.89
ECM16YMR128W YER188WP40103 239 aa3.24□□□□□ -1.89
ECM16YMR128W YMR210WQ03649 449 aa3.24□□□□□ -1.89
ECM16YMR128W IRC19Q07843 230 aa3.24□□□□□ -1.89
ECM16YMR128W NCE102Q12207 173 aaRIP-Chip data3.24□□□□□ -1.89not detected
ECM16YMR128W NHP6AP11632 93 aaKnown RBP3.24□□□□□ -1.89
ECM16YMR128W YGL010WP25338 174 aa3.24□□□□□ -1.89
ECM16YMR128W RFA3P26755 122 aaKnown RBP3.24□□□□□ -1.89
ECM16YMR128W SWD3P38123 315 aa3.24□□□□□ -1.89
ECM16YMR128W YGR269WP40326 108 aa3.24□□□□□ -1.89
ECM16YMR128W CIN5P40917 295 aa3.24□□□□□ -1.89
ECM16YMR128W LOC1P43586 204 aaPredicted RBP3.24□□□□□ -1.89
ECM16YMR128W HRI1Q05905 244 aaKnown RBP3.24□□□□□ -1.89
ECM16YMR128W RFU1Q08003 200 aa3.24□□□□□ -1.89
ECM16YMR128W POM33Q12164 279 aa3.24□□□□□ -1.89
ECM16YMR128W DFR1P07807 211 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
ECM16YMR128W YEL057CP39983 233 aa3.24□□□□□ -1.89
ECM16YMR128W RHO5P53879 331 aaKnown RBP3.24□□□□□ -1.89
ECM16YMR128W ATC1Q04005 294 aa3.24□□□□□ -1.89
ECM16YMR128W YOP1Q12402 180 aa3.24□□□□□ -1.89
ECM16YMR128W YPR108W-AQ3E7B3 70 aa3.24□□□□□ -1.89
ECM16YMR128W YLR365WQ7LIF2 110 aa3.24□□□□□ -1.89
ECM16YMR128W YAL064W-BO13512 126 aa3.23□□□□□ -1.89
ECM16YMR128W ILV5P06168 395 aaKnown RBP3.23□□□□□ -1.89
ECM16YMR128W CWP1P28319 239 aa3.23□□□□□ -1.89
ECM16YMR128W YMR007WQ03675 126 aa3.23□□□□□ -1.89
ECM16YMR128W GIS1Q03833 894 aa3.23□□□□□ -1.89
ECM16YMR128W SHH3Q04487 196 aa3.23□□□□□ -1.89
ECM16YMR128W DIC1Q06143 298 aa3.23□□□□□ -1.89
ECM16YMR128W LDS2Q08218 356 aa3.23□□□□□ -1.89
ECM16YMR128W MDH2P22133 377 aa3.23□□□□□ -1.89
ECM16YMR128W DAD2P36162 133 aa3.23□□□□□ -1.89
ECM16YMR128W HSP10P38910 106 aa3.23□□□□□ -1.89
ECM16YMR128W SUR2P38992 349 aa3.23□□□□□ -1.89
ECM16YMR128W SMD3P43321 101 aaKnown RBP3.23□□□□□ -1.89
ECM16YMR128W CRH1P53301 507 aa3.23□□□□□ -1.89
ECM16YMR128W YLR460CP54007 376 aa3.23□□□□□ -1.89
ECM16YMR128W YPL067CQ02754 198 aa3.23□□□□□ -1.89
ECM16YMR128W YMR166CQ03829 368 aa3.23□□□□□ -1.89
ECM16YMR128W NAT3Q06504 195 aa3.23□□□□□ -1.89
ECM16YMR128W FRE8Q12209 686 aa3.23□□□□□ -1.89
ECM16YMR128W PAR32Q12515 295 aaKnown RBP3.23□□□□□ -1.89
ECM16YMR128W PEX4P29340 183 aa3.23□□□□□ -1.89
ECM16YMR128W PAM17P36147 197 aa3.23□□□□□ -1.89
ECM16YMR128W YJL193WP39542 402 aa3.23□□□□□ -1.89
ECM16YMR128W YJL163CP46996 555 aa3.23□□□□□ -1.89
ECM16YMR128W YJL028WP47062 111 aa3.23□□□□□ -1.89
ECM16YMR128W RDL2Q08742 149 aaKnown RBP3.23□□□□□ -1.89
ECM16YMR128W FYV7Q12247 151 aa3.23□□□□□ -1.89
ECM16YMR128W YIL046W-AQ3E7Z4 54 aa3.23□□□□□ -1.89
ECM16YMR128W COA6Q3E846 104 aa3.23□□□□□ -1.89
ECM16YMR128W CDC36P06100 191 aaPredicted RBP3.22□□□□□ -1.89
ECM16YMR128W YCR006CP25350 157 aa3.22□□□□□ -1.89
ECM16YMR128W IMG1P25626 169 aa3.22□□□□□ -1.89
ECM16YMR128W MRPL15P36523 253 aa3.22□□□□□ -1.89
ECM16YMR128W YER134CP40081 178 aa3.22□□□□□ -1.89
ECM16YMR128W YIL163CP40448 117 aa3.22□□□□□ -1.89
ECM16YMR128W TRM9P49957 279 aa3.22□□□□□ -1.89
ECM16YMR128W IZH1Q03419 316 aa3.22□□□□□ -1.89
ECM16YMR128W FRQ1Q06389 190 aa3.22□□□□□ -1.89
ECM16YMR128W PIN3Q06449 215 aa3.22□□□□□ -1.89
ECM16YMR128W POC4Q12245 148 aaPredicted RBP3.22□□□□□ -1.89
ECM16YMR128W ERV1P27882 189 aa3.22□□□□□ -1.89
ECM16YMR128W QDR3P38227 689 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms