RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C YPR013CQ12145 317 aa2.08□□□□□ -2.08
PRE8YML092C DGK1Q12382 290 aa2.08□□□□□ -2.08
PRE8YML092C DCP1Q12517 231 aaPredicted RBP2.08□□□□□ -2.08
PRE8YML092C PMR1P13586 950 aa2.07□□□□□ -2.08
PRE8YML092C RPL3P14126 387 aaKnown RBP2.07□□□□□ -2.08
PRE8YML092C IDP1P21954 428 aaKnown RBP2.07□□□□□ -2.08
PRE8YML092C PRE7P23724 241 aaKnown RBP2.07□□□□□ -2.08
PRE8YML092C VMA5P31412 392 aaKnown RBP2.07□□□□□ -2.08
PRE8YML092C YPS1P32329 569 aa2.07□□□□□ -2.08
PRE8YML092C ERG3P32353 365 aa2.07□□□□□ -2.08
PRE8YML092C PAU2P32612 120 aa2.07□□□□□ -2.08
PRE8YML092C PDC2P32896 925 aa2.07□□□□□ -2.08
PRE8YML092C YBL059WP34224 193 aa2.07□□□□□ -2.08
PRE8YML092C AST1P35183 429 aa2.07□□□□□ -2.08
PRE8YML092C MRPL38P35996 138 aaPredicted RBP2.07□□□□□ -2.08
PRE8YML092C SLM4P38247 162 aa2.07□□□□□ -2.08
PRE8YML092C GDT1P38301 280 aaPredicted RBP2.07□□□□□ -2.08
PRE8YML092C YER137CP40083 148 aaKnown RBP2.07□□□□□ -2.08
PRE8YML092C YNL194CP40169 301 aa2.07□□□□□ -2.08
PRE8YML092C PRM5P40476 318 aa2.07□□□□□ -2.08
PRE8YML092C GAT4P40569 121 aa2.07□□□□□ -2.08
PRE8YML092C ATG18P43601 500 aa2.07□□□□□ -2.08
PRE8YML092C GPI14P47088 403 aaKnown RBP2.07□□□□□ -2.08
PRE8YML092C DIE2P50076 525 aa2.07□□□□□ -2.08
PRE8YML092C LPP1Q04396 274 aa2.07□□□□□ -2.08
PRE8YML092C FSH2Q05015 223 aa2.07□□□□□ -2.08
PRE8YML092C YGK3Q12222 375 aaPredicted RBP2.07□□□□□ -2.08
PRE8YML092C RPL9AP05738 191 aaKnown RBP2.06□□□□□ -2.08
PRE8YML092C FUS3P16892 353 aaKnown RBP2.06□□□□□ -2.08
PRE8YML092C ROX3P25046 220 aa2.06□□□□□ -2.08
PRE8YML092C LSB5P25369 354 aa2.06□□□□□ -2.08
PRE8YML092C HYM1P32464 399 aa2.06□□□□□ -2.08
PRE8YML092C YEL045CP32616 141 aa2.06□□□□□ -2.08
PRE8YML092C ALK2P32789 676 aaPredicted RBP2.06□□□□□ -2.08
PRE8YML092C QDR3P38227 689 aa2.06□□□□□ -2.08
PRE8YML092C YBR137WP38276 179 aa2.06□□□□□ -2.08
PRE8YML092C MIC12P38341 106 aa2.06□□□□□ -2.08
PRE8YML092C GEP4P38812 185 aa2.06□□□□□ -2.08
PRE8YML092C RFC2P40348 353 aa2.06□□□□□ -2.08
PRE8YML092C SNL1P40548 159 aa2.06□□□□□ -2.08
PRE8YML092C YJR012CP47087 207 aa2.06□□□□□ -2.08
PRE8YML092C BXI1P48558 297 aa2.06□□□□□ -2.08
PRE8YML092C ERG25P53045 309 aa2.06□□□□□ -2.08
PRE8YML092C DOC1P53068 250 aa2.06□□□□□ -2.08
PRE8YML092C SLX9P53251 210 aaPredicted RBP2.06□□□□□ -2.08
PRE8YML092C ALG9P53868 555 aaKnown RBP2.06□□□□□ -2.08
PRE8YML092C CAB5Q03941 241 aa2.06□□□□□ -2.08
PRE8YML092C YOR292CQ08743 309 aa2.06□□□□□ -2.08
PRE8YML092C YJR112W-AQ3E743 109 aa2.06□□□□□ -2.08
PRE8YML092C YLR099W-AQ3E798 87 aa2.06□□□□□ -2.08
PRE8YML092C YER078W-AQ3E7A2 54 aa2.06□□□□□ -2.08
PRE8YML092C HTB1P02293 131 aaKnown RBP2.05□□□□□ -2.08
PRE8YML092C HHF1P02309 103 aaKnown RBP2.05□□□□□ -2.08
PRE8YML092C CKA1P15790 372 aa2.05□□□□□ -2.08
PRE8YML092C YMR31P19955 123 aa2.05□□□□□ -2.08
PRE8YML092C AHC2P25649 128 aa2.05□□□□□ -2.08
PRE8YML092C RFA3P26755 122 aaKnown RBP2.05□□□□□ -2.08
PRE8YML092C ECM25P32525 599 aa2.05□□□□□ -2.08
PRE8YML092C YUH1P35127 236 aa2.05□□□□□ -2.08
PRE8YML092C EGD2P38879 174 aaKnown RBP2.05□□□□□ -2.08
PRE8YML092C PCL7P40186 285 aa2.05□□□□□ -2.08
PRE8YML092C SIM1P40472 476 aa2.05□□□□□ -2.08
PRE8YML092C AGX1P43567 385 aa2.05□□□□□ -2.08
PRE8YML092C RPS0BP46654 252 aaKnown RBP2.05□□□□□ -2.08
PRE8YML092C FMP33P46998 180 aa2.05□□□□□ -2.08
PRE8YML092C CPD1P53314 239 aa2.05□□□□□ -2.08
PRE8YML092C CAF40P53829 373 aa2.05□□□□□ -2.08
PRE8YML092C COX12Q01519 83 aa2.05□□□□□ -2.08
PRE8YML092C PEX10Q05568 337 aa2.05□□□□□ -2.08
PRE8YML092C PBA1Q05778 276 aa2.05□□□□□ -2.08
PRE8YML092C YLR365WQ7LIF2 110 aa2.05□□□□□ -2.08
PRE8YML092C ODC2Q99297 307 aa2.05□□□□□ -2.08
PRE8YML092C SOD1P00445 154 aaKnown RBP2.04□□□□□ -2.08
PRE8YML092C GCN4P03069 281 aa2.04□□□□□ -2.08
PRE8YML092C HIS3P06633 220 aa2.04□□□□□ -2.08
PRE8YML092C PET494P07390 489 aaPredicted RBP2.04□□□□□ -2.08
PRE8YML092C MDH1P17505 334 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
PRE8YML092C IFM1P25038 676 aa2.04□□□□□ -2.08
PRE8YML092C SRY1P36007 326 aa2.04□□□□□ -2.08
PRE8YML092C YPT31P38555 223 aaKnown RBP2.04□□□□□ -2.08
PRE8YML092C NVJ1P38881 321 aa2.04□□□□□ -2.08
PRE8YML092C PRE5P40302 234 aaKnown RBP2.04□□□□□ -2.08
PRE8YML092C LST8P41318 303 aa2.04□□□□□ -2.08
PRE8YML092C SYS1P41544 203 aa2.04□□□□□ -2.08
PRE8YML092C MIC26P50087 233 aa2.04□□□□□ -2.08
PRE8YML092C CTF19Q02732 369 aa2.04□□□□□ -2.08
PRE8YML092C TSA2Q04120 196 aa2.04□□□□□ -2.08
PRE8YML092C HNT1Q04344 158 aaKnown RBP2.04□□□□□ -2.08
PRE8YML092C ATG39Q06159 398 aa2.04□□□□□ -2.08
PRE8YML092C TIR4Q12218 487 aaPredicted RBP2.04□□□□□ -2.08
PRE8YML092C BOL1Q3E793 110 aa2.04□□□□□ -2.08
PRE8YML092C YPR108W-AQ3E7B3 70 aa2.04□□□□□ -2.08
PRE8YML092C YEL009C-AA0A023PZF2 135 aa2.03□□□□□ -2.08
PRE8YML092C PET54P10834 293 aa2.03□□□□□ -2.08
PRE8YML092C SEN2P16658 377 aa2.03□□□□□ -2.08
PRE8YML092C RTT105P40063 208 aa2.03□□□□□ -2.08
PRE8YML092C YJL218WP40892 196 aaKnown RBP2.03□□□□□ -2.08
PRE8YML092C YJR011CP47086 261 aaPredicted RBP2.03□□□□□ -2.08
PRE8YML092C ALG13P53178 202 aa2.03□□□□□ -2.08
PRE8YML092C SWT21P53873 357 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms