RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	SIR2	P06700	562 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	RIP1	P08067	215 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	RPL12A	P0CX53	165 aa	Known RBP	4.6	□□□□□ -1.67
PWP1	YLR196W	RPL12B	P0CX54	165 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	HMRA1	P0CY11	126 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	MSN2	P33748	704 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	YKL151C	P36059	337 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	GLO1	P50107	326 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	ERG26	P53199	349 aa	Known RBP	4.6	□□□□□ -1.67
PWP1	YLR196W	SMM1	P53720	384 aa	Known RBP	4.6	□□□□□ -1.67
PWP1	YLR196W	YMR178W	Q03219	274 aa	Known RBP	4.6	□□□□□ -1.67
PWP1	YLR196W	COQ11	Q05892	277 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	YOR376W	Q08900	122 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	TIR4	Q12218	487 aa	Predicted RBP	4.6	□□□□□ -1.67
PWP1	YLR196W	FRE7	Q12333	620 aa		4.6	□□□□□ -1.67
PWP1	YLR196W	PHO85	P17157	305 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	IES6	P32617	166 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	CAT5	P41735	233 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	TES1	P41903	349 aa	Known RBP	4.59	□□□□□ -1.67
PWP1	YLR196W	YDL186W	P48568	277 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	SBH1	P52870	82 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	PRM8	P53174	237 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	WSC2	P53832	503 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	YIF1	P53845	314 aa	Known RBP	4.59	□□□□□ -1.67
PWP1	YLR196W	FIT1	Q04433	528 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	HPF1	Q05164	967 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	MCA1	Q08601	432 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	Q0182	Q9ZZW1	134 aa		4.59	□□□□□ -1.67
PWP1	YLR196W	ADH1	P00330	348 aa	Known RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	COX1	P00401	534 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	PAU19	P0CE85	124 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	PAU21	P0CE86	164 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	PAU22	P0CE87	164 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	GAS1	P22146	559 aa	Known RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	VMA3	P25515	160 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	PAU3	P25610	124 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	MLF3	P32047	452 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	SPS18	P32572	300 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	NNK1	P36003	928 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	ECM33	P38248	429 aa	Known RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	RTC2	P38279	296 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	YNL198C	P40166	100 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	MPM1	P40364	252 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	YIL059C	P40520	121 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	APQ12	P40532	138 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	PRY1	P47032	299 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	SDT1	P53078	280 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	VHT1	P53241	593 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	DUG3	P53871	357 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	YHM2	Q04013	314 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	FCF1	Q05498	189 aa	Predicted RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	YPR174C	Q06616	221 aa	Predicted RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	CTR3	Q06686	241 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	RDL2	Q08742	149 aa	Known RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	RPL28	P02406	149 aa	Known RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	CPA1	P07258	411 aa	Known RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	YCR007C	P25354	239 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	TRX3	P25372	127 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	MRP20	P32387	263 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	MSL1	P40567	111 aa	Predicted RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	YGR149W	P48236	432 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	BRR6	P53062	197 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	YMR082C	Q04276	118 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	YPQ1	Q12010	308 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	RPL7B	Q12213	244 aa	Known RBP	4.58	□□□□□ -1.68
PWP1	YLR196W	SPO24	Q3E752	67 aa		4.58	□□□□□ -1.68
PWP1	YLR196W	YLR302C	O13544	120 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-LR1	P0C2J4	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	RPB10	P22139	70 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-C	P25383	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	CSE2	P33308	149 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	MTR2	P34232	184 aa	Known RBP	4.57	□□□□□ -1.68
PWP1	YLR196W	ASP1	P38986	381 aa	Predicted RBP	4.57	□□□□□ -1.68
PWP1	YLR196W	LYS1	P38998	373 aa	RIP-Chip data	4.57	□□□□□ -1.68	not detected
PWP1	YLR196W	ELO1	P39540	310 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	SPO73	P40031	143 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	PFS2	P42841	465 aa	Known RBP	4.57	□□□□□ -1.68
PWP1	YLR196W	SNO3	P43544	222 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	ATG27	P46989	271 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	SNO2	P53823	222 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-DR2	Q03483	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	MSS11	Q03825	758 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	YDL157C	Q12082	118 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-B	Q12260	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-OR2	Q12293	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	SWM1	Q12379	170 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-DR1	Q12392	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-OR1	Q12439	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	YBL112C	Q3E7Y4	105 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	TY2A-DR3	Q99303	438 aa		4.57	□□□□□ -1.68
PWP1	YLR196W	RAD6	P06104	172 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	MSI1	P13712	422 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	SAM35	P14693	329 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	CDC43	P18898	376 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	ATS1	P31386	333 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	ISF1	P32488	338 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	CMC1	P36064	111 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	TEM1	P38987	245 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	XBP1	P40489	647 aa		4.56	□□□□□ -1.68
PWP1	YLR196W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms