RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W TY1A-DR3Q12441 440 aa8.15□□□□□ -1.1
SHH4YLR164W YHR213W-AQ8TGT4 77 aa8.15□□□□□ -1.1
SHH4YLR164W ADE8P04161 214 aa8.14□□□□□ -1.11
SHH4YLR164W RPP1AP05318 106 aaPredicted RBP8.14□□□□□ -1.11
SHH4YLR164W NOP1P15646 327 aaKnown RBP8.14□□□□□ -1.11
SHH4YLR164W COX15P40086 486 aa8.14□□□□□ -1.11
SHH4YLR164W EMC5P40540 141 aa8.14□□□□□ -1.11
SHH4YLR164W YJL213WP40896 331 aa8.14□□□□□ -1.11
SHH4YLR164W WWM1P43582 211 aaKnown RBP8.14□□□□□ -1.11
SHH4YLR164W YJR056CP47115 236 aa8.14□□□□□ -1.11
SHH4YLR164W SRB7P47822 140 aa8.14□□□□□ -1.11
SHH4YLR164W PDR17P53844 350 aa8.14□□□□□ -1.11
SHH4YLR164W ODC1Q03028 310 aa8.14□□□□□ -1.11
SHH4YLR164W YDL242WQ07746 117 aa8.14□□□□□ -1.11
SHH4YLR164W RAX2Q12465 1220 aa8.14□□□□□ -1.11
SHH4YLR164W MRS3P10566 314 aa8.13□□□□□ -1.11
SHH4YLR164W FCY2P17064 533 aa8.13□□□□□ -1.11
SHH4YLR164W UPS2P35200 230 aa8.13□□□□□ -1.11
SHH4YLR164W ECM31P38122 312 aa8.13□□□□□ -1.11
SHH4YLR164W YGR269WP40326 108 aa8.13□□□□□ -1.11
SHH4YLR164W ERV25P54837 211 aaKnown RBP8.13□□□□□ -1.11
SHH4YLR164W ADD37Q03233 198 aa8.13□□□□□ -1.11
SHH4YLR164W DCS1Q06151 350 aa8.13□□□□□ -1.11
SHH4YLR164W MCH1Q07376 486 aa8.13□□□□□ -1.11
SHH4YLR164W AGC1Q12482 902 aa8.13□□□□□ -1.11
SHH4YLR164W HTB1P02293 131 aaKnown RBP8.12□□□□□ -1.11
SHH4YLR164W FLO5P38894 1075 aa8.12□□□□□ -1.11
SHH4YLR164W SNN1P48232 102 aa8.12□□□□□ -1.11
SHH4YLR164W YOR015WQ12169 119 aa8.12□□□□□ -1.11
SHH4YLR164W YGL258W-AQ3E740 77 aa8.12□□□□□ -1.11
SHH4YLR164W HBN1Q96VH4 193 aa8.12□□□□□ -1.11
SHH4YLR164W WSS1P38838 269 aa8.11□□□□□ -1.11
SHH4YLR164W PSD1P39006 500 aa8.11□□□□□ -1.11
SHH4YLR164W FMP41P53889 259 aaKnown RBP8.11□□□□□ -1.11
SHH4YLR164W MRPS17Q03246 237 aaPredicted RBP8.11□□□□□ -1.11
SHH4YLR164W FRQ1Q06389 190 aa8.11□□□□□ -1.11
SHH4YLR164W SOD1P00445 154 aaKnown RBP8.1□□□□□ -1.11
SHH4YLR164W YCL042WP25572 119 aa8.1□□□□□ -1.11
SHH4YLR164W CDC50P25656 391 aa8.1□□□□□ -1.11
SHH4YLR164W ABM1P47146 123 aa8.1□□□□□ -1.11
SHH4YLR164W YCL001W-AP87012 153 aa8.1□□□□□ -1.11
SHH4YLR164W YMR166CQ03829 368 aa8.1□□□□□ -1.11
SHH4YLR164W YHP1Q04116 353 aa8.1□□□□□ -1.11
SHH4YLR164W DAL4Q04895 635 aa8.1□□□□□ -1.11
SHH4YLR164W YPS3Q12303 508 aa8.1□□□□□ -1.11
SHH4YLR164W COX19Q3E731 98 aa8.1□□□□□ -1.11
SHH4YLR164W RPS25BP0C0T4 108 aaKnown RBP8.09□□□□□ -1.11
SHH4YLR164W BGL2P15703 313 aaKnown RBP8.09□□□□□ -1.11
SHH4YLR164W ZRC1P20107 442 aa8.09□□□□□ -1.11
SHH4YLR164W AHT1P29589 182 aa8.09□□□□□ -1.11
SHH4YLR164W YBR184WP38299 523 aa8.09□□□□□ -1.11
SHH4YLR164W GNP1P48813 663 aa8.09□□□□□ -1.11
SHH4YLR164W JID1Q12350 301 aa8.09□□□□□ -1.11
SHH4YLR164W POM34Q12445 299 aa8.09□□□□□ -1.11
SHH4YLR164W RPS25AQ3E792 108 aaPredicted RBP8.09□□□□□ -1.11
SHH4YLR164W VMA9Q3E7B6 73 aa8.09□□□□□ -1.11
SHH4YLR164W URA2P07259 2214 aaKnown RBP8.09□□□□□ -1.12
SHH4YLR164W YDR157WA0A023PZE8 133 aa8.08□□□□□ -1.12
SHH4YLR164W SPO13P23624 291 aa8.08□□□□□ -1.12
SHH4YLR164W TCA17P32613 152 aa8.08□□□□□ -1.12
SHH4YLR164W PIC2P40035 300 aa8.08□□□□□ -1.12
SHH4YLR164W NSA2P40078 261 aaKnown RBP8.08□□□□□ -1.12
SHH4YLR164W LST8P41318 303 aa8.08□□□□□ -1.12
SHH4YLR164W YNR066CP53752 436 aa8.08□□□□□ -1.12
SHH4YLR164W ARR3Q06598 404 aa8.08□□□□□ -1.12
SHH4YLR164W NDE2Q07500 545 aa8.08□□□□□ -1.12
SHH4YLR164W Q0142Q9ZZW4 58 aa8.08□□□□□ -1.12
SHH4YLR164W TY1A-DR4O74302 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-AP0CX57 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-PR1P0CX58 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-ORP0CX59 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-PR2P0CX60 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-DR5P0CX65 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-ER2P0CX66 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-GR3P0CX67 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-LR1P0CX68 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-MR2P0CX69 440 aa8.07□□□□□ -1.12
SHH4YLR164W HEM13P11353 328 aaKnown RBP8.07□□□□□ -1.12
SHH4YLR164W HXT14P42833 540 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-JR2P47099 440 aa8.07□□□□□ -1.12
SHH4YLR164W ERG25P53045 309 aa8.07□□□□□ -1.12
SHH4YLR164W ISU1Q03020 165 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-DR1Q03856 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-ML1Q04706 440 aaKnown RBP8.07□□□□□ -1.12
SHH4YLR164W TY1A-BRQ12217 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-NL2Q12470 440 aa8.07□□□□□ -1.12
SHH4YLR164W TY1A-GR2Q12485 440 aa8.07□□□□□ -1.12
SHH4YLR164W PEX7P39108 375 aa8.06□□□□□ -1.12
SHH4YLR164W SPC25P40014 221 aa8.06□□□□□ -1.12
SHH4YLR164W CAF16P43569 289 aa8.06□□□□□ -1.12
SHH4YLR164W YJR015WP47090 510 aa8.06□□□□□ -1.12
SHH4YLR164W MCM22P47167 239 aa8.06□□□□□ -1.12
SHH4YLR164W MSK1P32048 576 aa8.05□□□□□ -1.12
SHH4YLR164W YBL059WP34224 193 aa8.05□□□□□ -1.12
SHH4YLR164W YIP1P53039 248 aa8.05□□□□□ -1.12
SHH4YLR164W YMR007WQ03675 126 aa8.05□□□□□ -1.12
SHH4YLR164W YER145C-AA0A023PYF4 145 aa8.04□□□□□ -1.12
SHH4YLR164W YMR316C-AI2HB70 103 aa8.04□□□□□ -1.12
SHH4YLR164W RPB9P27999 122 aa8.04□□□□□ -1.12
SHH4YLR164W QDR3P38227 689 aa8.04□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms