RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YCT1Q12235 531 aa2.35□□□□□ -2.03
SDO1YLR022C JLP1Q12358 412 aa2.35□□□□□ -2.03
SDO1YLR022C RPN6Q12377 434 aa2.35□□□□□ -2.03
SDO1YLR022C SIR2P06700 562 aa2.34□□□□□ -2.03
SDO1YLR022C GRX2P17695 143 aaKnown RBP2.34□□□□□ -2.03
SDO1YLR022C RPS1BP23248 255 aaKnown RBP2.34□□□□□ -2.03
SDO1YLR022C ALK2P32789 676 aaPredicted RBP2.34□□□□□ -2.03
SDO1YLR022C ZRT3P34240 503 aa2.34□□□□□ -2.03
SDO1YLR022C MID2P36027 376 aa2.34□□□□□ -2.03
SDO1YLR022C YBR063CP38083 404 aa2.34□□□□□ -2.03
SDO1YLR022C TRM5P38793 499 aa2.34□□□□□ -2.03
SDO1YLR022C SUR2P38992 349 aa2.34□□□□□ -2.03
SDO1YLR022C ERG28P40030 148 aa2.34□□□□□ -2.03
SDO1YLR022C PIR5P46999 287 aa2.34□□□□□ -2.03
SDO1YLR022C MIC26P50087 233 aa2.34□□□□□ -2.03
SDO1YLR022C MAL13P53338 473 aa2.34□□□□□ -2.03
SDO1YLR022C DIG2Q03373 323 aaKnown RBP2.34□□□□□ -2.03
SDO1YLR022C TDA1Q03533 586 aa2.34□□□□□ -2.03
SDO1YLR022C FSH2Q05015 223 aa2.34□□□□□ -2.03
SDO1YLR022C YOL131WQ08270 108 aa2.34□□□□□ -2.03
SDO1YLR022C PRM3Q08931 133 aa2.34□□□□□ -2.03
SDO1YLR022C YLR053CQ12026 108 aa2.34□□□□□ -2.03
SDO1YLR022C YDL199CQ12407 687 aa2.34□□□□□ -2.03
SDO1YLR022C COX5BP00425 151 aa2.33□□□□□ -2.04
SDO1YLR022C HTB1P02293 131 aaKnown RBP2.33□□□□□ -2.04
SDO1YLR022C HTB2P02294 131 aa2.33□□□□□ -2.04
SDO1YLR022C MIR1P23641 311 aaKnown RBP2.33□□□□□ -2.04
SDO1YLR022C ROX3P25046 220 aa2.33□□□□□ -2.04
SDO1YLR022C PEX3P28795 441 aa2.33□□□□□ -2.04
SDO1YLR022C HOM6P31116 359 aaKnown RBP2.33□□□□□ -2.04
SDO1YLR022C QRI5P32344 111 aa2.33□□□□□ -2.04
SDO1YLR022C YKL075CP36083 450 aa2.33□□□□□ -2.04
SDO1YLR022C SRL3P36167 246 aa2.33□□□□□ -2.04
SDO1YLR022C RTC3P38804 111 aaPredicted RBP2.33□□□□□ -2.04
SDO1YLR022C MTW1P39731 289 aa2.33□□□□□ -2.04
SDO1YLR022C GON7P46984 123 aa2.33□□□□□ -2.04
SDO1YLR022C YJR085CP47131 105 aaKnown RBP2.33□□□□□ -2.04
SDO1YLR022C XPT1P47165 209 aa2.33□□□□□ -2.04
SDO1YLR022C VHT1P53241 593 aa2.33□□□□□ -2.04
SDO1YLR022C YNL095CP53932 642 aa2.33□□□□□ -2.04
SDO1YLR022C YNL010WP53981 241 aaKnown RBP2.33□□□□□ -2.04
SDO1YLR022C DIA1P54005 336 aa2.33□□□□□ -2.04
SDO1YLR022C YDR274CP87283 123 aa2.33□□□□□ -2.04
SDO1YLR022C YDR248CQ03786 193 aa2.33□□□□□ -2.04
SDO1YLR022C PEX12Q04370 399 aa2.33□□□□□ -2.04
SDO1YLR022C DPP1Q05521 289 aa2.33□□□□□ -2.04
SDO1YLR022C ATG17Q06410 417 aa2.33□□□□□ -2.04
SDO1YLR022C FCY1Q12178 158 aa2.33□□□□□ -2.04
SDO1YLR022C RIO1Q12196 484 aaKnown RBP2.33□□□□□ -2.04
SDO1YLR022C YKL183C-AQ3E765 70 aa2.33□□□□□ -2.04
SDO1YLR022C BGL2P15703 313 aaKnown RBP2.32□□□□□ -2.04
SDO1YLR022C RPC19P28000 142 aaKnown RBP2.32□□□□□ -2.04
SDO1YLR022C NRG2P38082 220 aa2.32□□□□□ -2.04
SDO1YLR022C ECM31P38122 312 aa2.32□□□□□ -2.04
SDO1YLR022C YPC1P38298 316 aa2.32□□□□□ -2.04
SDO1YLR022C IKI1P38874 309 aa2.32□□□□□ -2.04
SDO1YLR022C SMB1P40018 196 aaKnown RBP2.32□□□□□ -2.04
SDO1YLR022C YNL194CP40169 301 aa2.32□□□□□ -2.04
SDO1YLR022C MRPL49P40858 161 aaPredicted RBP2.32□□□□□ -2.04
SDO1YLR022C YFR057WP43625 151 aa2.32□□□□□ -2.04
SDO1YLR022C YJR056CP47115 236 aa2.32□□□□□ -2.04
SDO1YLR022C NUP57P48837 541 aa2.32□□□□□ -2.04
SDO1YLR022C RMR1P53060 241 aa2.32□□□□□ -2.04
SDO1YLR022C MPC1P53157 130 aaKnown RBP2.32□□□□□ -2.04
SDO1YLR022C CTF19Q02732 369 aa2.32□□□□□ -2.04
SDO1YLR022C YPL067CQ02754 198 aa2.32□□□□□ -2.04
SDO1YLR022C YML018CQ03730 393 aa2.32□□□□□ -2.04
SDO1YLR022C PEX30Q06169 523 aa2.32□□□□□ -2.04
SDO1YLR022C VIK1Q12045 647 aa2.32□□□□□ -2.04
SDO1YLR022C JID1Q12350 301 aa2.32□□□□□ -2.04
SDO1YLR022C SAS5Q99314 248 aa2.32□□□□□ -2.04
SDO1YLR022C RPL28P02406 149 aaKnown RBP2.31□□□□□ -2.04
SDO1YLR022C MRPL20P22354 195 aaPredicted RBP2.31□□□□□ -2.04
SDO1YLR022C CDC10P25342 322 aaKnown RBP2.31□□□□□ -2.04
SDO1YLR022C AST1P35183 429 aa2.31□□□□□ -2.04
SDO1YLR022C FMP23P38231 175 aa2.31□□□□□ -2.04
SDO1YLR022C PEX22P39718 180 aa2.31□□□□□ -2.04
SDO1YLR022C RGI1P40043 161 aaPredicted RBP2.31□□□□□ -2.04
SDO1YLR022C YJL016WP47072 561 aa2.31□□□□□ -2.04
SDO1YLR022C CWC23P52868 283 aaPredicted RBP2.31□□□□□ -2.04
SDO1YLR022C YPS5P53057 165 aa2.31□□□□□ -2.04
SDO1YLR022C YGL235WP53071 178 aa2.31□□□□□ -2.04
SDO1YLR022C TPN1P53099 579 aa2.31□□□□□ -2.04
SDO1YLR022C SSU72P53538 206 aaPredicted RBP2.31□□□□□ -2.04
SDO1YLR022C DML1Q03652 475 aa2.31□□□□□ -2.04
SDO1YLR022C SEC13Q04491 297 aaKnown RBP2.31□□□□□ -2.04
SDO1YLR022C SML1Q04964 104 aa2.31□□□□□ -2.04
SDO1YLR022C FAR8Q05040 523 aa2.31□□□□□ -2.04
SDO1YLR022C ARC18Q05933 178 aaKnown RBP2.31□□□□□ -2.04
SDO1YLR022C RDS3Q06835 107 aaPredicted RBP2.31□□□□□ -2.04
SDO1YLR022C HEM25Q07534 307 aa2.31□□□□□ -2.04
SDO1YLR022C SFM1Q12314 213 aa2.31□□□□□ -2.04
SDO1YLR022C DCN1Q12395 269 aa2.31□□□□□ -2.04
SDO1YLR022C YPL119C-AQ3E751 87 aa2.31□□□□□ -2.04
SDO1YLR022C YKL018C-AQ3E7A7 99 aa2.31□□□□□ -2.04
SDO1YLR022C QCR7P00128 127 aa2.3□□□□□ -2.04
SDO1YLR022C TPI1P00942 248 aaKnown RBP2.3□□□□□ -2.04
SDO1YLR022C PET494P07390 489 aaPredicted RBP2.3□□□□□ -2.04
SDO1YLR022C YOL163WP0CF20 169 aa2.3□□□□□ -2.04
SDO1YLR022C SNF6P18888 332 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms