RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	ACS1	Q01574	713 aa		4.23	□□□□□ -1.73
KTI12	YKL110C	YMR090W	Q04304	227 aa	Known RBP	4.23	□□□□□ -1.73
KTI12	YKL110C	AGC1	Q12482	902 aa		4.23	□□□□□ -1.73
KTI12	YKL110C	YMR105W-A	Q8TGS8	64 aa		4.23	□□□□□ -1.73
KTI12	YKL110C	ROX3	P25046	220 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	CDC50	P25656	391 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	AHT1	P29589	182 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	NTF2	P33331	125 aa	Known RBP	4.22	□□□□□ -1.73
KTI12	YKL110C	YKL107W	P34251	309 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	YBR220C	P38318	560 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	PRS3	P38689	320 aa	Known RBP	4.22	□□□□□ -1.73
KTI12	YKL110C	CTR2	P38865	189 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	IKI1	P38874	309 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	PET100	P38958	111 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	TOK1	P40310	691 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	GEP7	P53171	287 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	CRH1	P53301	507 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	HHO1	P53551	258 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	YNR066C	P53752	436 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	HCH1	P53834	153 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	CRZ1	P53968	678 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	ECM18	Q04623	453 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	FSH2	Q05015	223 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	YOL029C	Q08187	201 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	BOL1	Q3E793	110 aa		4.22	□□□□□ -1.73
KTI12	YKL110C	YDR157W	A0A023PZE8	133 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	URA5	P13298	226 aa	Known RBP	4.21	□□□□□ -1.74
KTI12	YKL110C	SPO13	P23624	291 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	CPR5	P35176	225 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	RIB5	P38145	238 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	ATG8	P38182	117 aa	RIP-Chip data	4.21	□□□□□ -1.74	not detected
KTI12	YKL110C	YGR269W	P40326	108 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	POG1	P40473	351 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	NSE4	P43124	402 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	PIR5	P46999	287 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	YGR026W	P53217	278 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	YGR050C	P53231	118 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	PDR17	P53844	350 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	SUR7	P54003	302 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	SED1	Q01589	338 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	RPL21A	Q02753	160 aa	Known RBP	4.21	□□□□□ -1.74
KTI12	YKL110C	LIP2	Q06005	328 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	HRD1	Q08109	551 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	ATP16	Q12165	160 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	RPL21B	Q12672	160 aa	Known RBP	4.21	□□□□□ -1.74
KTI12	YKL110C	YNL162W-A	Q3E7A8	72 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	TRA1	P38811	3744 aa		4.21	□□□□□ -1.74
KTI12	YKL110C	LSB5	P25369	354 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	DAL80	P26343	269 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	YBR292C	P38357	123 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	PGD1	P40356	397 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	BNS1	P50084	137 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	ERG25	P53045	309 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	PEF1	P53238	335 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	SMM1	P53720	384 aa	Known RBP	4.2	□□□□□ -1.74
KTI12	YKL110C	YPL067C	Q02754	198 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	ARR3	Q06598	404 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	POC4	Q12245	148 aa	Predicted RBP	4.2	□□□□□ -1.74
KTI12	YKL110C	ERV2	Q12284	196 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	YOS1	Q3E834	85 aa		4.2	□□□□□ -1.74
KTI12	YKL110C	RPS25B	P0C0T4	108 aa	Known RBP	4.19	□□□□□ -1.74
KTI12	YKL110C	MRS3	P10566	314 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	RPB3	P16370	318 aa	Known RBP	4.19	□□□□□ -1.74
KTI12	YKL110C	FCY2	P17064	533 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	YMR31	P19955	123 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	YBR013C	P38215	129 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	SHG1	P38337	142 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	ECM14	P38836	430 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	DFG10	P40526	253 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	VMA21	P41806	77 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	DAN1	P47178	298 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	TIM21	P53220	239 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	YAP1802	P53309	568 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	ALG12	P53730	551 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	DYN2	Q02647	92 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	AVO2	Q04749	426 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	DCS1	Q06151	350 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	PRP11	Q07350	266 aa	Predicted RBP	4.19	□□□□□ -1.74
KTI12	YKL110C	COX17	Q12287	69 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	POM34	Q12445	299 aa		4.19	□□□□□ -1.74
KTI12	YKL110C	RPS25A	Q3E792	108 aa	Predicted RBP	4.19	□□□□□ -1.74
KTI12	YKL110C	VPS63	O13549	108 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	ADH3	P07246	375 aa	Known RBP	4.18	□□□□□ -1.74
KTI12	YKL110C	RPS23A	P0CX29	145 aa	Known RBP	4.18	□□□□□ -1.74
KTI12	YKL110C	RPS23B	P0CX30	145 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	SPS100	P13130	326 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	COQ3	P27680	312 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	DAL3	P32459	195 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	YBL059W	P34224	193 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	MIA40	P36046	403 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	YGP1	P38616	354 aa	Known RBP	4.18	□□□□□ -1.74
KTI12	YKL110C	RTC3	P38804	111 aa	Predicted RBP	4.18	□□□□□ -1.74
KTI12	YKL110C	YHR138C	P38841	114 aa	Predicted RBP	4.18	□□□□□ -1.74
KTI12	YKL110C	COX15	P40086	486 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	BNA2	P47125	453 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	TTI2	P47168	421 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	YMR007W	Q03675	126 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	CTR3	Q06686	241 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	YPD1	Q07688	167 aa		4.18	□□□□□ -1.74
KTI12	YKL110C	SME1	Q12330	94 aa	Predicted RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms