RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	YMR144W	P40214	342 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	DLS1	P40366	167 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YFL040W	P43562	540 aa		0.98	□□□□□ -2.25
APL1	YJR005W	BUD13	P46947	266 aa	Predicted RBP	0.98	□□□□□ -2.25
APL1	YJR005W	COQ5	P49017	307 aa		0.98	□□□□□ -2.25
APL1	YJR005W	ALG13	P53178	202 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SYF2	P53277	215 aa	Predicted RBP	0.98	□□□□□ -2.25
APL1	YJR005W	SAY1	P53324	424 aa		0.98	□□□□□ -2.25
APL1	YJR005W	FMP41	P53889	259 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	AAH1	P53909	347 aa		0.98	□□□□□ -2.25
APL1	YJR005W	COF1	Q03048	143 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	YMR099C	Q03161	297 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	INP1	Q03694	420 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YMR166C	Q03829	368 aa		0.98	□□□□□ -2.25
APL1	YJR005W	INM2	Q05533	292 aa		0.98	□□□□□ -2.25
APL1	YJR005W	RDL2	Q08742	149 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	MCP1	Q12106	302 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YOR342C	Q12182	319 aa		0.98	□□□□□ -2.25
APL1	YJR005W	FRE8	Q12209	686 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SIA1	Q12212	622 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YLR118C	Q12354	227 aa		0.98	□□□□□ -2.25
APL1	YJR005W	COA6	Q3E846	104 aa		0.98	□□□□□ -2.25
APL1	YJR005W	ISD11	Q6Q560	94 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YRF1-3	P0CX14	1859 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YRF1-7	P0CX15	1859 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YRF1-6	P53819	1859 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SWR1	Q05471	1514 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YIL177C	P40434	1758 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YJL225C	P40889	1758 aa		0.98	□□□□□ -2.25
APL1	YJR005W	TY4B-H	P0C2J7	1802 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SNF2	P22082	1703 aa		0.98	□□□□□ -2.25
APL1	YJR005W	FMP49	A0A023PZB3	126 aa		0.98	□□□□□ -2.25
APL1	YJR005W	TPK3	P05986	398 aa		0.98	□□□□□ -2.25
APL1	YJR005W	ADH3	P07246	375 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	YAR066W	P0CX18	203 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YHR214W	P0CX19	203 aa		0.98	□□□□□ -2.25
APL1	YJR005W	TIR1	P10863	254 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SNF4	P12904	322 aa		0.98	□□□□□ -2.25
APL1	YJR005W	OAC1	P32332	324 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SPS18	P32572	300 aa		0.98	□□□□□ -2.25
APL1	YJR005W	COX13	P32799	129 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SNC2	P33328	115 aa		0.98	□□□□□ -2.25
APL1	YJR005W	MRPS5	P33759	307 aa		0.98	□□□□□ -2.25
APL1	YJR005W	ATG8	P38182	117 aa	RIP-Chip data	0.98	□□□□□ -2.25	not detected
APL1	YJR005W	YHR177W	P38867	453 aa		0.98	□□□□□ -2.25
APL1	YJR005W	MST28	P39552	234 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YEL075C	P39972	122 aa		0.98	□□□□□ -2.25
APL1	YJR005W	RPL13B	P40212	199 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	YIL059C	P40520	121 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YPS6	P40583	537 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SAS2	P40963	338 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YNL320W	P42840	284 aa		0.98	□□□□□ -2.25
APL1	YJR005W	ATG18	P43601	500 aa		0.98	□□□□□ -2.25
APL1	YJR005W	GON7	P46984	123 aa		0.98	□□□□□ -2.25
APL1	YJR005W	BRR6	P53062	197 aa		0.98	□□□□□ -2.25
APL1	YJR005W	PRM8	P53174	237 aa		0.98	□□□□□ -2.25
APL1	YJR005W	THG1	P53215	237 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	YGR039W	P53225	103 aa		0.98	□□□□□ -2.25
APL1	YJR005W	PCP1	P53259	346 aa		0.98	□□□□□ -2.25
APL1	YJR005W	CLD1	P53264	445 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YGR168C	P53293	376 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YIF1	P53845	314 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	GPI15	P53961	229 aa		0.98	□□□□□ -2.25
APL1	YJR005W	GRX5	Q02784	150 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YML018C	Q03730	393 aa		0.98	□□□□□ -2.25
APL1	YJR005W	THI74	Q04083	370 aa		0.98	□□□□□ -2.25
APL1	YJR005W	CUE4	Q04201	117 aa	Predicted RBP	0.98	□□□□□ -2.25
APL1	YJR005W	GRH1	Q04410	372 aa	Known RBP	0.98	□□□□□ -2.25
APL1	YJR005W	SNT309	Q06091	175 aa	Predicted RBP	0.98	□□□□□ -2.25
APL1	YJR005W	TAZ1	Q06510	381 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YLR030W	Q07967	263 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YOL131W	Q08270	108 aa		0.98	□□□□□ -2.25
APL1	YJR005W	PEX27	Q08580	376 aa		0.98	□□□□□ -2.25
APL1	YJR005W	NAT5	Q08689	176 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YOR376W	Q08900	122 aa		0.98	□□□□□ -2.25
APL1	YJR005W	MCT1	Q12283	360 aa		0.98	□□□□□ -2.25
APL1	YJR005W	YOR338W	Q99326	363 aa		0.98	□□□□□ -2.25
APL1	YJR005W	ATG2	P53855	1592 aa		0.98	□□□□□ -2.25
APL1	YJR005W	SNQ2	P32568	1501 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	RAS2	P01120	322 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	RAD6	P06104	172 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SEC4	P07560	215 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YOL163W	P0CF20	169 aa		0.97	□□□□□ -2.25
APL1	YJR005W	HMRA1	P0CY11	126 aa		0.97	□□□□□ -2.25
APL1	YJR005W	TAH1	P25638	111 aa	Predicted RBP	0.97	□□□□□ -2.25
APL1	YJR005W	INO2	P26798	304 aa		0.97	□□□□□ -2.25
APL1	YJR005W	RIM1	P32445	135 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	REC114	P32841	428 aa		0.97	□□□□□ -2.25
APL1	YJR005W	MRPL6	P32904	214 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SKN1	P33336	771 aa		0.97	□□□□□ -2.25
APL1	YJR005W	TMA19	P35691	167 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	SHB17	P36136	271 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	ECM33	P38248	429 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YHL049C	P38722	271 aa		0.97	□□□□□ -2.25
APL1	YJR005W	TRR2	P38816	342 aa		0.97	□□□□□ -2.25
APL1	YJR005W	ECM14	P38836	430 aa		0.97	□□□□□ -2.25
APL1	YJR005W	IPT1	P38954	527 aa		0.97	□□□□□ -2.25
APL1	YJR005W	TEM1	P38987	245 aa		0.97	□□□□□ -2.25
APL1	YJR005W	PEX22	P39718	180 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YEA4	P40004	342 aa		0.97	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 274.1 ms