RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W YNL234WP53857 426 aa5.63□□□□□ -1.51
APE4YHR113W DUG3P53871 357 aa5.63□□□□□ -1.51
APE4YHR113W MOT3P54785 490 aaKnown RBP5.63□□□□□ -1.51
APE4YHR113W MIX17Q03667 156 aa5.63□□□□□ -1.51
APE4YHR113W TMA10Q06177 86 aa5.63□□□□□ -1.51
APE4YHR113W SRL1Q08673 210 aa5.63□□□□□ -1.51
APE4YHR113W PDC2P32896 925 aa5.62□□□□□ -1.51
APE4YHR113W RFC2P40348 353 aa5.62□□□□□ -1.51
APE4YHR113W BNA1P47096 177 aa5.62□□□□□ -1.51
APE4YHR113W MSO1P53604 210 aaKnown RBP5.62□□□□□ -1.51
APE4YHR113W ACT1P60010 375 aaKnown RBP5.62□□□□□ -1.51
APE4YHR113W DID2P69771 204 aa5.62□□□□□ -1.51
APE4YHR113W YPL108WQ02872 168 aaPredicted RBP5.62□□□□□ -1.51
APE4YHR113W YDL086WQ07505 273 aa5.62□□□□□ -1.51
APE4YHR113W HTB1P02293 131 aaKnown RBP5.61□□□□□ -1.51
APE4YHR113W CKS1P20486 150 aaKnown RBP5.61□□□□□ -1.51
APE4YHR113W MRS4P23500 304 aa5.61□□□□□ -1.51
APE4YHR113W YFL054CP43549 646 aa5.61□□□□□ -1.51
APE4YHR113W YJR111CP47148 283 aaKnown RBP5.61□□□□□ -1.51
APE4YHR113W JAC1P53193 184 aa5.61□□□□□ -1.51
APE4YHR113W CRH1P53301 507 aa5.61□□□□□ -1.51
APE4YHR113W GPI15P53961 229 aa5.61□□□□□ -1.51
APE4YHR113W YLR224WQ05947 369 aa5.61□□□□□ -1.51
APE4YHR113W ATG31Q12421 196 aa5.61□□□□□ -1.51
APE4YHR113W AIM45Q12480 344 aaKnown RBP5.61□□□□□ -1.51
APE4YHR113W STF1P01098 86 aa5.6□□□□□ -1.51
APE4YHR113W SEC22P22214 214 aa5.6□□□□□ -1.51
APE4YHR113W ERV1P27882 189 aa5.6□□□□□ -1.51
APE4YHR113W DAL3P32459 195 aa5.6□□□□□ -1.51
APE4YHR113W ATP3P38077 311 aaKnown RBP5.6□□□□□ -1.51
APE4YHR113W ECM31P38122 312 aa5.6□□□□□ -1.51
APE4YHR113W GPP2P40106 250 aaKnown RBP5.6□□□□□ -1.51
APE4YHR113W RPL13BP40212 199 aaKnown RBP5.6□□□□□ -1.51
APE4YHR113W SWM2P40342 146 aa5.6□□□□□ -1.51
APE4YHR113W DFG10P40526 253 aa5.6□□□□□ -1.51
APE4YHR113W ECM27P47144 725 aa5.6□□□□□ -1.51
APE4YHR113W PNC1P53184 216 aaKnown RBP5.6□□□□□ -1.51
APE4YHR113W YMR166CQ03829 368 aa5.6□□□□□ -1.51
APE4YHR113W PLP1Q04004 230 aa5.6□□□□□ -1.51
APE4YHR113W YMR090WQ04304 227 aaKnown RBP5.6□□□□□ -1.51
APE4YHR113W FCF2Q12035 217 aaPredicted RBP5.6□□□□□ -1.51
APE4YHR113W RPL13AQ12690 199 aaPredicted RBP5.6□□□□□ -1.51
APE4YHR113W YGL194C-AQ2V2P6 80 aa5.6□□□□□ -1.51
APE4YHR113W YBR255C-AQ3E776 120 aa5.6□□□□□ -1.51
APE4YHR113W URA2P07259 2214 aaKnown RBP5.6□□□□□ -1.51
APE4YHR113W VPS63O13549 108 aa5.59□□□□□ -1.51
APE4YHR113W URA5P13298 226 aaKnown RBP5.59□□□□□ -1.51
APE4YHR113W SUA7P29055 345 aaPredicted RBP5.59□□□□□ -1.51
APE4YHR113W SPS18P32572 300 aa5.59□□□□□ -1.51
APE4YHR113W YPC1P38298 316 aa5.59□□□□□ -1.51
APE4YHR113W ARP3P47117 449 aaKnown RBP5.59□□□□□ -1.51
APE4YHR113W ERP1Q05359 219 aaKnown RBP5.59□□□□□ -1.51
APE4YHR113W MCH1Q07376 486 aa5.59□□□□□ -1.51
APE4YHR113W YNG1Q08465 219 aa5.59□□□□□ -1.51
APE4YHR113W RAX2Q12465 1220 aa5.59□□□□□ -1.51
APE4YHR113W NOP1P15646 327 aaKnown RBP5.58□□□□□ -1.52
APE4YHR113W FEN2P25621 512 aaKnown RBP5.58□□□□□ -1.52
APE4YHR113W YKL162CP36052 402 aa5.58□□□□□ -1.52
APE4YHR113W VMA22P38784 181 aa5.58□□□□□ -1.52
APE4YHR113W PHM8P40025 321 aa5.58□□□□□ -1.52
APE4YHR113W YGR050CP53231 118 aa5.58□□□□□ -1.52
APE4YHR113W YIF1P53845 314 aaKnown RBP5.58□□□□□ -1.52
APE4YHR113W DYN2Q02647 92 aa5.58□□□□□ -1.52
APE4YHR113W STD1Q02794 444 aa5.58□□□□□ -1.52
APE4YHR113W TOM40P23644 387 aaKnown RBP5.58□□□□□ -1.52
APE4YHR113W RTC3P38804 111 aaPredicted RBP5.58□□□□□ -1.52
APE4YHR113W YEA6P39953 335 aa5.58□□□□□ -1.52
APE4YHR113W YDL186WP48568 277 aa5.58□□□□□ -1.52
APE4YHR113W NCE103P53615 221 aa5.58□□□□□ -1.52
APE4YHR113W YKL075CP36083 450 aa5.57□□□□□ -1.52
APE4YHR113W YCR041WP37265 110 aa5.57□□□□□ -1.52
APE4YHR113W GEP4P38812 185 aa5.57□□□□□ -1.52
APE4YHR113W COX15P40086 486 aa5.57□□□□□ -1.52
APE4YHR113W CAF16P43569 289 aa5.57□□□□□ -1.52
APE4YHR113W YGL117WP53133 265 aa5.57□□□□□ -1.52
APE4YHR113W BER1Q06688 274 aaKnown RBP5.57□□□□□ -1.52
APE4YHR113W MSA1Q08471 629 aa5.57□□□□□ -1.52
APE4YHR113W COA2Q3E823 68 aa5.57□□□□□ -1.52
APE4YHR113W TRP4P07285 380 aaPredicted RBP5.56□□□□□ -1.52
APE4YHR113W RPL11AP0C0W9 174 aaKnown RBP5.56□□□□□ -1.52
APE4YHR113W FCY2P17064 533 aa5.56□□□□□ -1.52
APE4YHR113W SSU72P53538 206 aaPredicted RBP5.56□□□□□ -1.52
APE4YHR113W PDR17P53844 350 aa5.56□□□□□ -1.52
APE4YHR113W AGC1Q12482 902 aa5.56□□□□□ -1.52
APE4YHR113W YGL258W-AQ3E740 77 aa5.56□□□□□ -1.52
APE4YHR113W RPL11BQ3E757 174 aaPredicted RBP5.56□□□□□ -1.52
APE4YHR113W ISN1Q99312 450 aa5.56□□□□□ -1.52
APE4YHR113W YPT31P38555 223 aaKnown RBP5.55□□□□□ -1.52
APE4YHR113W NSA2P40078 261 aaKnown RBP5.55□□□□□ -1.52
APE4YHR113W LST8P41318 303 aa5.55□□□□□ -1.52
APE4YHR113W WWM1P43582 211 aaKnown RBP5.55□□□□□ -1.52
APE4YHR113W TAD2P47058 250 aa5.55□□□□□ -1.52
APE4YHR113W TIM44Q01852 431 aa5.55□□□□□ -1.52
APE4YHR113W DCS1Q06151 350 aa5.55□□□□□ -1.52
APE4YHR113W ANT1Q06497 328 aa5.55□□□□□ -1.52
APE4YHR113W SRL3P36167 246 aa5.54□□□□□ -1.52
APE4YHR113W SLM6P38343 150 aa5.54□□□□□ -1.52
APE4YHR113W WSS1P38838 269 aa5.54□□□□□ -1.52
APE4YHR113W PSD1P39006 500 aa5.54□□□□□ -1.52
APE4YHR113W YJL163CP46996 555 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms