RNA–Protein interactions for RNA: YHR081W

LRP1, Transcript of Nuclear exosome-associated nucleic acid binding protein, yeast

Gene LRP1, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRP1	YHR081W	SKI6	P46948	246 aa	Predicted RBP	0.86	□□□□□ -2.27
LRP1	YHR081W	RNH1	Q04740	348 aa		0.86	□□□□□ -2.27
LRP1	YHR081W	YMR252C	Q04814	134 aa		0.86	□□□□□ -2.27
LRP1	YHR081W	PRP11	Q07350	266 aa	Predicted RBP	0.86	□□□□□ -2.27
LRP1	YHR081W	YAR023C	D6VPM8	179 aa		0.85	□□□□□ -2.27
LRP1	YHR081W	MBF1	O14467	151 aa	Known RBP	0.85	□□□□□ -2.27
LRP1	YHR081W	HTB1	P02293	131 aa	Known RBP	0.85	□□□□□ -2.27
LRP1	YHR081W	HTB2	P02294	131 aa		0.85	□□□□□ -2.27
LRP1	YHR081W	ASF2	P32448	525 aa	Predicted RBP	0.85	□□□□□ -2.27
LRP1	YHR081W	RFC4	P40339	323 aa	Known RBP	0.85	□□□□□ -2.27
LRP1	YHR081W	MRPS17	Q03246	237 aa	Predicted RBP	0.85	□□□□□ -2.27
LRP1	YHR081W	SHH3	Q04487	196 aa		0.85	□□□□□ -2.27
LRP1	YHR081W	IRC23	Q08416	157 aa		0.85	□□□□□ -2.27
LRP1	YHR081W	GIS3	Q12418	502 aa		0.85	□□□□□ -2.27
LRP1	YHR081W	CDC36	P06100	191 aa	Predicted RBP	0.84	□□□□□ -2.27
LRP1	YHR081W	YER188C-A	P0C0V2	99 aa		0.84	□□□□□ -2.27
LRP1	YHR081W	RPB4	P20433	221 aa	Predicted RBP	0.84	□□□□□ -2.27
LRP1	YHR081W	RPB7	P34087	171 aa		0.84	□□□□□ -2.27
LRP1	YHR081W	YHL018W	P38744	120 aa	Predicted RBP	0.84	□□□□□ -2.27
LRP1	YHR081W	ARP3	P47117	449 aa	Known RBP	0.84	□□□□□ -2.27
LRP1	YHR081W	RPL37B	P51402	88 aa	Known RBP	0.84	□□□□□ -2.27
LRP1	YHR081W	YMR099C	Q03161	297 aa	Known RBP	0.84	□□□□□ -2.27
LRP1	YHR081W	YLR031W	Q07978	186 aa		0.84	□□□□□ -2.27
LRP1	YHR081W	COX8	P04039	78 aa		0.83	□□□□□ -2.28
LRP1	YHR081W	MRS1	P07266	363 aa		0.83	□□□□□ -2.28
LRP1	YHR081W	PHO85	P17157	305 aa		0.83	□□□□□ -2.28
LRP1	YHR081W	NTG1	P31378	399 aa		0.83	□□□□□ -2.28
LRP1	YHR081W	SFK1	P35735	353 aa		0.83	□□□□□ -2.28
LRP1	YHR081W	YMR315W	Q04869	349 aa	Known RBP	0.83	□□□□□ -2.28
LRP1	YHR081W	YPR013C	Q12145	317 aa		0.83	□□□□□ -2.28
LRP1	YHR081W	MTW1	P39731	289 aa		0.82	□□□□□ -2.28
LRP1	YHR081W	MMS2	P53152	137 aa		0.82	□□□□□ -2.28
LRP1	YHR081W	NOP19	P53317	196 aa	Predicted RBP	0.82	□□□□□ -2.28
LRP1	YHR081W	UPS3	Q04006	179 aa		0.82	□□□□□ -2.28
LRP1	YHR081W	RNH202	Q05635	350 aa		0.82	□□□□□ -2.28
LRP1	YHR081W	YLR036C	Q07986	203 aa		0.82	□□□□□ -2.28
LRP1	YHR081W	YOL014W	Q08110	124 aa		0.82	□□□□□ -2.28
LRP1	YHR081W	ABP140	Q08641	628 aa	Known RBP	0.82	□□□□□ -2.28
LRP1	YHR081W	CBF1	P17106	351 aa		0.81	□□□□□ -2.28
LRP1	YHR081W	ARO7	P32178	256 aa		0.81	□□□□□ -2.28
LRP1	YHR081W	YEL008W	P40001	126 aa		0.81	□□□□□ -2.28
LRP1	YHR081W	ALB1	P47019	175 aa	Predicted RBP	0.81	□□□□□ -2.28
LRP1	YHR081W	TDA4	P47153	279 aa		0.81	□□□□□ -2.28
LRP1	YHR081W	THG1	P53215	237 aa	Known RBP	0.81	□□□□□ -2.28
LRP1	YHR081W	FIT2	Q08906	153 aa		0.81	□□□□□ -2.28
LRP1	YHR081W	YCL012C	Q8J0M4	134 aa		0.81	□□□□□ -2.28
LRP1	YHR081W	YML100W-A	Q8TGT0	57 aa		0.81	□□□□□ -2.28
LRP1	YHR081W	MATALPHA2	P0CY08	210 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	HMLALPHA2	P0CY09	210 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	TIR1	P10863	254 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	SNF4	P12904	322 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	YCL042W	P25572	119 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	STP22	P25604	385 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	MGT1	P26188	188 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	GSP2	P32836	220 aa	Known RBP	0.8	□□□□□ -2.28
LRP1	YHR081W	PAM17	P36147	197 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	CUP9	P41817	306 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	TMA22	P47089	198 aa	Predicted RBP	0.8	□□□□□ -2.28
LRP1	YHR081W	YJR111C	P47148	283 aa	Known RBP	0.8	□□□□□ -2.28
LRP1	YHR081W	YNL033W	P53964	284 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	YLR460C	P54007	376 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	TIM11	P81449	96 aa	Predicted RBP	0.8	□□□□□ -2.28
LRP1	YHR081W	AIM36	Q03798	255 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	LCL2	Q08045	131 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	COA3	Q3E7B2	85 aa		0.8	□□□□□ -2.28
LRP1	YHR081W	RPS24A	P0CX31	135 aa	Known RBP	0.79	□□□□□ -2.28
LRP1	YHR081W	RPS24B	P0CX32	135 aa	Known RBP	0.79	□□□□□ -2.28
LRP1	YHR081W	YNL184C	P53876	108 aa		0.79	□□□□□ -2.28
LRP1	YHR081W	VPS71	Q03433	280 aa		0.79	□□□□□ -2.28
LRP1	YHR081W	YMR253C	Q04835	414 aa		0.79	□□□□□ -2.28
LRP1	YHR081W	NAT3	Q06504	195 aa		0.79	□□□□□ -2.28
LRP1	YHR081W	QCR7	P00128	127 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	IDP1	P21954	428 aa	Known RBP	0.78	□□□□□ -2.28
LRP1	YHR081W	YKT6	P36015	200 aa	Known RBP	0.78	□□□□□ -2.28
LRP1	YHR081W	MRPL15	P36523	253 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	SPC25	P40014	221 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	PDS1	P40316	373 aa	Predicted RBP	0.78	□□□□□ -2.28
LRP1	YHR081W	CGR1	P53188	120 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	RTC4	P53850	401 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	YDR391C	Q04170	232 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	GET4	Q12125	312 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	ADF1	Q2V2Q1	113 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	IGO2	Q9P305	131 aa		0.78	□□□□□ -2.28
LRP1	YHR081W	JIP3	O13555	125 aa		0.77	□□□□□ -2.29
LRP1	YHR081W	YCR023C	P25351	611 aa		0.77	□□□□□ -2.29
LRP1	YHR081W	UBC8	P28263	218 aa		0.77	□□□□□ -2.29
LRP1	YHR081W	FMP23	P38231	175 aa		0.77	□□□□□ -2.29
LRP1	YHR081W	MET31	Q03081	177 aa		0.77	□□□□□ -2.29
LRP1	YHR081W	CWC21	Q03375	135 aa	Known RBP	0.77	□□□□□ -2.29
LRP1	YHR081W	ARO80	Q04052	950 aa		0.77	□□□□□ -2.29
LRP1	YHR081W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.77	□□□□□ -2.29
LRP1	YHR081W	YBR242W	P38331	238 aa		0.76	□□□□□ -2.29
LRP1	YHR081W	YFL019C	P43576	117 aa		0.76	□□□□□ -2.29
LRP1	YHR081W	YOL024W	Q08172	172 aa		0.76	□□□□□ -2.29
LRP1	YHR081W	YPR203W	Q08994	102 aa		0.76	□□□□□ -2.29
LRP1	YHR081W	YOR015W	Q12169	119 aa		0.76	□□□□□ -2.29
LRP1	YHR081W	YLR412C-A	Q3E742	68 aa		0.76	□□□□□ -2.29
LRP1	YHR081W	RRP17	Q04031	235 aa	Predicted RBP	0.75	□□□□□ -2.29
LRP1	YHR081W	YPR014C	Q6B0W2	109 aa		0.75	□□□□□ -2.29
LRP1	YHR081W	AHT1	P29589	182 aa		0.74	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms