RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C PRP11Q07350 266 aaPredicted RBP1.26□□□□□ -2.21
CUP1-1YHR053C IRC23Q08416 157 aa1.26□□□□□ -2.21
CUP1-1YHR053C MBF1O14467 151 aaKnown RBP1.25□□□□□ -2.21
CUP1-1YHR053C SER2P42941 309 aa1.25□□□□□ -2.21
CUP1-1YHR053C DAD4P69851 72 aa1.25□□□□□ -2.21
CUP1-1YHR053C YHL018WP38744 120 aaPredicted RBP1.24□□□□□ -2.21
CUP1-1YHR053C HPA3P39979 161 aa1.24□□□□□ -2.21
CUP1-1YHR053C RFC4P40339 323 aaKnown RBP1.24□□□□□ -2.21
CUP1-1YHR053C SKI6P46948 246 aaPredicted RBP1.24□□□□□ -2.21
CUP1-1YHR053C YMR099CQ03161 297 aaKnown RBP1.24□□□□□ -2.21
CUP1-1YHR053C RNH1Q04740 348 aa1.24□□□□□ -2.21
CUP1-1YHR053C YMR252CQ04814 134 aa1.24□□□□□ -2.21
CUP1-1YHR053C YMR226CQ05016 267 aaKnown RBP1.24□□□□□ -2.21
CUP1-1YHR053C YAR023CD6VPM8 179 aa1.23□□□□□ -2.21
CUP1-1YHR053C YER188C-AP0C0V2 99 aa1.23□□□□□ -2.21
CUP1-1YHR053C UBC12P52491 188 aa1.23□□□□□ -2.21
CUP1-1YHR053C SHH3Q04487 196 aa1.23□□□□□ -2.21
CUP1-1YHR053C MTW1P39731 289 aa1.22□□□□□ -2.21
CUP1-1YHR053C YLR036CQ07986 203 aa1.22□□□□□ -2.21
CUP1-1YHR053C YPR013CQ12145 317 aa1.22□□□□□ -2.21
CUP1-1YHR053C COX8P04039 78 aa1.21□□□□□ -2.22
CUP1-1YHR053C CBF1P17106 351 aa1.21□□□□□ -2.22
CUP1-1YHR053C YCL042WP25572 119 aa1.21□□□□□ -2.22
CUP1-1YHR053C ASF2P32448 525 aaPredicted RBP1.21□□□□□ -2.22
CUP1-1YHR053C RPB7P34087 171 aa1.21□□□□□ -2.22
CUP1-1YHR053C ARP3P47117 449 aaKnown RBP1.21□□□□□ -2.22
CUP1-1YHR053C MMS2P53152 137 aa1.21□□□□□ -2.22
CUP1-1YHR053C UPS3Q04006 179 aa1.21□□□□□ -2.22
CUP1-1YHR053C YOL014WQ08110 124 aa1.21□□□□□ -2.22
CUP1-1YHR053C MRS1P07266 363 aa1.2□□□□□ -2.22
CUP1-1YHR053C STP22P25604 385 aa1.2□□□□□ -2.22
CUP1-1YHR053C SFK1P35735 353 aa1.2□□□□□ -2.22
CUP1-1YHR053C MRPS17Q03246 237 aaPredicted RBP1.2□□□□□ -2.22
CUP1-1YHR053C AIM36Q03798 255 aa1.2□□□□□ -2.22
CUP1-1YHR053C YLR031WQ07978 186 aa1.2□□□□□ -2.22
CUP1-1YHR053C FIT2Q08906 153 aa1.2□□□□□ -2.22
CUP1-1YHR053C RPB4P20433 221 aaPredicted RBP1.19□□□□□ -2.22
CUP1-1YHR053C NTG1P31378 399 aa1.19□□□□□ -2.22
CUP1-1YHR053C YEL008WP40001 126 aa1.19□□□□□ -2.22
CUP1-1YHR053C RNH202Q05635 350 aa1.19□□□□□ -2.22
CUP1-1YHR053C YML100W-AQ8TGT0 57 aa1.19□□□□□ -2.22
CUP1-1YHR053C PHO85P17157 305 aa1.18□□□□□ -2.22
CUP1-1YHR053C ARO7P32178 256 aa1.18□□□□□ -2.22
CUP1-1YHR053C PAM17P36147 197 aa1.18□□□□□ -2.22
CUP1-1YHR053C CUP9P41817 306 aa1.18□□□□□ -2.22
CUP1-1YHR053C MATALPHA2P0CY08 210 aa1.17□□□□□ -2.22
CUP1-1YHR053C HMLALPHA2P0CY09 210 aa1.17□□□□□ -2.22
CUP1-1YHR053C GSP2P32836 220 aaKnown RBP1.17□□□□□ -2.22
CUP1-1YHR053C ALB1P47019 175 aaPredicted RBP1.17□□□□□ -2.22
CUP1-1YHR053C THG1P53215 237 aaKnown RBP1.17□□□□□ -2.22
CUP1-1YHR053C MGT1P26188 188 aa1.16□□□□□ -2.22
CUP1-1YHR053C YJR111CP47148 283 aaKnown RBP1.16□□□□□ -2.22
CUP1-1YHR053C YNL033WP53964 284 aa1.16□□□□□ -2.22
CUP1-1YHR053C YLR460CP54007 376 aa1.16□□□□□ -2.22
CUP1-1YHR053C COA3Q3E7B2 85 aa1.16□□□□□ -2.22
CUP1-1YHR053C SNF4P12904 322 aa1.15□□□□□ -2.23
CUP1-1YHR053C TMA22P47089 198 aaPredicted RBP1.15□□□□□ -2.23
CUP1-1YHR053C NOP19P53317 196 aaPredicted RBP1.15□□□□□ -2.23
CUP1-1YHR053C YMR253CQ04835 414 aa1.15□□□□□ -2.23
CUP1-1YHR053C IGO2Q9P305 131 aa1.15□□□□□ -2.23
CUP1-1YHR053C TIR1P10863 254 aa1.14□□□□□ -2.23
CUP1-1YHR053C TDA4P47153 279 aa1.14□□□□□ -2.23
CUP1-1YHR053C YNL184CP53876 108 aa1.14□□□□□ -2.23
CUP1-1YHR053C YMR315WQ04869 349 aaKnown RBP1.14□□□□□ -2.23
CUP1-1YHR053C ABP140Q08641 628 aaKnown RBP1.14□□□□□ -2.23
CUP1-1YHR053C YCL012CQ8J0M4 134 aa1.14□□□□□ -2.23
CUP1-1YHR053C TIM11P81449 96 aaPredicted RBP1.13□□□□□ -2.23
CUP1-1YHR053C VPS71Q03433 280 aa1.13□□□□□ -2.23
CUP1-1YHR053C ADF1Q2V2Q1 113 aa1.13□□□□□ -2.23
CUP1-1YHR053C RPS24AP0CX31 135 aaKnown RBP1.12□□□□□ -2.23
CUP1-1YHR053C RPS24BP0CX32 135 aaKnown RBP1.12□□□□□ -2.23
CUP1-1YHR053C YKT6P36015 200 aaKnown RBP1.12□□□□□ -2.23
CUP1-1YHR053C SPC25P40014 221 aa1.12□□□□□ -2.23
CUP1-1YHR053C RTC4P53850 401 aa1.12□□□□□ -2.23
CUP1-1YHR053C MET31Q03081 177 aa1.12□□□□□ -2.23
CUP1-1YHR053C NAT3Q06504 195 aa1.12□□□□□ -2.23
CUP1-1YHR053C GET4Q12125 312 aa1.12□□□□□ -2.23
CUP1-1YHR053C QCR7P00128 127 aa1.11□□□□□ -2.23
CUP1-1YHR053C IDP1P21954 428 aaKnown RBP1.11□□□□□ -2.23
CUP1-1YHR053C MRPL15P36523 253 aa1.11□□□□□ -2.23
CUP1-1YHR053C PDS1P40316 373 aaPredicted RBP1.11□□□□□ -2.23
CUP1-1YHR053C CGR1P53188 120 aa1.11□□□□□ -2.23
CUP1-1YHR053C YDR391CQ04170 232 aa1.11□□□□□ -2.23
CUP1-1YHR053C YCR023CP25351 611 aa1.1□□□□□ -2.23
CUP1-1YHR053C LCL2Q08045 131 aa1.1□□□□□ -2.23
CUP1-1YHR053C UBC8P28263 218 aa1.09□□□□□ -2.23
CUP1-1YHR053C AHT1P29589 182 aa1.09□□□□□ -2.23
CUP1-1YHR053C YFL019CP43576 117 aa1.09□□□□□ -2.23
CUP1-1YHR053C RRP17Q04031 235 aaPredicted RBP1.09□□□□□ -2.23
CUP1-1YHR053C YOL024WQ08172 172 aa1.09□□□□□ -2.23
CUP1-1YHR053C YPR014CQ6B0W2 109 aa1.09□□□□□ -2.23
CUP1-1YHR053C DIG2Q03373 323 aaKnown RBP1.08□□□□□ -2.24
CUP1-1YHR053C SEN2P16658 377 aa1.07□□□□□ -2.24
CUP1-1YHR053C STF2P16965 84 aa1.07□□□□□ -2.24
CUP1-1YHR053C FMP23P38231 175 aa1.07□□□□□ -2.24
CUP1-1YHR053C PIR1Q03178 341 aa1.07□□□□□ -2.24
CUP1-1YHR053C CWC21Q03375 135 aaKnown RBP1.07□□□□□ -2.24
CUP1-1YHR053C ARO80Q04052 950 aa1.07□□□□□ -2.24
CUP1-1YHR053C YOR015WQ12169 119 aa1.07□□□□□ -2.24
CUP1-1YHR053C YOR342CQ12182 319 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms