RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A DGK1Q12382 290 aa2.35□□□□□ -2.03
EFG1YGR271C-A SLO1Q3E784 85 aa2.35□□□□□ -2.03
EFG1YGR271C-A PAN1P32521 1480 aa2.34□□□□□ -2.03
EFG1YGR271C-A YLR156WP0CE96 114 aa2.34□□□□□ -2.03
EFG1YGR271C-A YLR159WP0CE97 114 aa2.34□□□□□ -2.03
EFG1YGR271C-A YLR161WP0CE98 114 aa2.34□□□□□ -2.03
EFG1YGR271C-A RPL30P14120 105 aaKnown RBP2.34□□□□□ -2.03
EFG1YGR271C-A RCN1P36054 211 aa2.34□□□□□ -2.03
EFG1YGR271C-A ECM34P38728 170 aa2.34□□□□□ -2.03
EFG1YGR271C-A NSG1P38837 291 aa2.34□□□□□ -2.03
EFG1YGR271C-A YER137CP40083 148 aaKnown RBP2.34□□□□□ -2.03
EFG1YGR271C-A YPL073CP40323 161 aa2.34□□□□□ -2.03
EFG1YGR271C-A SOL1P50278 321 aa2.34□□□□□ -2.03
EFG1YGR271C-A ORM1P53224 222 aa2.34□□□□□ -2.03
EFG1YGR271C-A TIM13P53299 105 aa2.34□□□□□ -2.03
EFG1YGR271C-A YDR278CQ05612 105 aa2.34□□□□□ -2.03
EFG1YGR271C-A MCP1Q12106 302 aa2.34□□□□□ -2.03
EFG1YGR271C-A YOL085CQ99345 113 aa2.34□□□□□ -2.03
EFG1YGR271C-A REP2P03872 296 aa2.33□□□□□ -2.04
EFG1YGR271C-A SGA1P08019 549 aa2.33□□□□□ -2.04
EFG1YGR271C-A CCA1P21269 546 aa2.33□□□□□ -2.04
EFG1YGR271C-A PRE7P23724 241 aaKnown RBP2.33□□□□□ -2.04
EFG1YGR271C-A AGA2P32781 87 aa2.33□□□□□ -2.04
EFG1YGR271C-A SHE2P36068 246 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
EFG1YGR271C-A CSH1P38287 376 aa2.33□□□□□ -2.04
EFG1YGR271C-A SPO73P40031 143 aa2.33□□□□□ -2.04
EFG1YGR271C-A GLC8P41818 229 aa2.33□□□□□ -2.04
EFG1YGR271C-A SER2P42941 309 aa2.33□□□□□ -2.04
EFG1YGR271C-A OST2P46964 130 aa2.33□□□□□ -2.04
EFG1YGR271C-A APS3P47064 194 aa2.33□□□□□ -2.04
EFG1YGR271C-A YDR366CP87287 132 aa2.33□□□□□ -2.04
EFG1YGR271C-A FMN1Q03778 218 aa2.33□□□□□ -2.04
EFG1YGR271C-A NEJ1Q06148 342 aa2.33□□□□□ -2.04
EFG1YGR271C-A ATG39Q06159 398 aa2.33□□□□□ -2.04
EFG1YGR271C-A NKP2Q06162 153 aa2.33□□□□□ -2.04
EFG1YGR271C-A CNL1Q06333 122 aa2.33□□□□□ -2.04
EFG1YGR271C-A AKR2Q12013 749 aa2.33□□□□□ -2.04
EFG1YGR271C-A GEP5Q12393 293 aa2.33□□□□□ -2.04
EFG1YGR271C-A PSF1Q12488 208 aa2.33□□□□□ -2.04
EFG1YGR271C-A YLR412C-AQ3E742 68 aa2.33□□□□□ -2.04
EFG1YGR271C-A MDS3P53094 1487 aa2.33□□□□□ -2.04
EFG1YGR271C-A RPS19AP07280 144 aaKnown RBP2.32□□□□□ -2.04
EFG1YGR271C-A RPS19BP07281 144 aaPredicted RBP2.32□□□□□ -2.04
EFG1YGR271C-A COX10P21592 462 aa2.32□□□□□ -2.04
EFG1YGR271C-A TOM40P23644 387 aaKnown RBP2.32□□□□□ -2.04
EFG1YGR271C-A HSP30P25619 332 aa2.32□□□□□ -2.04
EFG1YGR271C-A YFR054CP43622 192 aa2.32□□□□□ -2.04
EFG1YGR271C-A YGR039WP53225 103 aa2.32□□□□□ -2.04
EFG1YGR271C-A CAB4P53332 305 aa2.32□□□□□ -2.04
EFG1YGR271C-A HHO1P53551 258 aa2.32□□□□□ -2.04
EFG1YGR271C-A DIG2Q03373 323 aaKnown RBP2.32□□□□□ -2.04
EFG1YGR271C-A PRP11Q07350 266 aaPredicted RBP2.32□□□□□ -2.04
EFG1YGR271C-A YOR304C-AO14468 76 aa2.31□□□□□ -2.04
EFG1YGR271C-A MRP49P32388 137 aa2.31□□□□□ -2.04
EFG1YGR271C-A VMA11P32842 164 aa2.31□□□□□ -2.04
EFG1YGR271C-A MRPL24P36525 258 aaPredicted RBP2.31□□□□□ -2.04
EFG1YGR271C-A RPS20P38701 121 aaKnown RBP2.31□□□□□ -2.04
EFG1YGR271C-A VMA7P39111 118 aa2.31□□□□□ -2.04
EFG1YGR271C-A HPM1P40481 377 aa2.31□□□□□ -2.04
EFG1YGR271C-A ALG9P53868 555 aaKnown RBP2.31□□□□□ -2.04
EFG1YGR271C-A ARL3Q02804 198 aa2.31□□□□□ -2.04
EFG1YGR271C-A YOL014WQ08110 124 aa2.31□□□□□ -2.04
EFG1YGR271C-A YML100W-AQ8TGT0 57 aa2.31□□□□□ -2.04
EFG1YGR271C-A FLO11P08640 1367 aa2.31□□□□□ -2.04
EFG1YGR271C-A SKI3P17883 1432 aaKnown RBP2.31□□□□□ -2.04
EFG1YGR271C-A RPL9AP05738 191 aaKnown RBP2.3□□□□□ -2.04
EFG1YGR271C-A KIN28P06242 306 aa2.3□□□□□ -2.04
EFG1YGR271C-A ATP5P09457 212 aa2.3□□□□□ -2.04
EFG1YGR271C-A ATP15P21306 62 aa2.3□□□□□ -2.04
EFG1YGR271C-A TFC1P32367 649 aa2.3□□□□□ -2.04
EFG1YGR271C-A PAN3P36102 679 aaPredicted RBP2.3□□□□□ -2.04
EFG1YGR271C-A OPY1P38271 328 aa2.3□□□□□ -2.04
EFG1YGR271C-A YHR125WP38831 101 aa2.3□□□□□ -2.04
EFG1YGR271C-A YER134CP40081 178 aa2.3□□□□□ -2.04
EFG1YGR271C-A ARC15P40518 154 aaRIP-Chip data2.3□□□□□ -2.04not detected
EFG1YGR271C-A YFL019CP43576 117 aa2.3□□□□□ -2.04
EFG1YGR271C-A ERJ5P43613 295 aaPredicted RBP2.3□□□□□ -2.04
EFG1YGR271C-A FIP1P45976 327 aa2.3□□□□□ -2.04
EFG1YGR271C-A ALB1P47019 175 aaPredicted RBP2.3□□□□□ -2.04
EFG1YGR271C-A RPL9BP51401 191 aaKnown RBP2.3□□□□□ -2.04
EFG1YGR271C-A SLM2P53955 656 aa2.3□□□□□ -2.04
EFG1YGR271C-A RSM10Q03201 203 aa2.3□□□□□ -2.04
EFG1YGR271C-A CGI121Q03705 181 aaKnown RBP2.3□□□□□ -2.04
EFG1YGR271C-A SPG3Q04398 127 aaPredicted RBP2.3□□□□□ -2.04
EFG1YGR271C-A YPR195CQ06594 109 aa2.3□□□□□ -2.04
EFG1YGR271C-A CPA1P07258 411 aaKnown RBP2.29□□□□□ -2.04
EFG1YGR271C-A PHO85P17157 305 aa2.29□□□□□ -2.04
EFG1YGR271C-A RPS1BP23248 255 aaKnown RBP2.29□□□□□ -2.04
EFG1YGR271C-A RSA4P25382 515 aaKnown RBP2.29□□□□□ -2.04
EFG1YGR271C-A FCY21P40039 528 aa2.29□□□□□ -2.04
EFG1YGR271C-A YER181CP40097 107 aa2.29□□□□□ -2.04
EFG1YGR271C-A GLR1P41921 483 aaKnown RBP2.29□□□□□ -2.04
EFG1YGR271C-A DSK2P48510 373 aa2.29□□□□□ -2.04
EFG1YGR271C-A APS2Q00381 147 aa2.29□□□□□ -2.04
EFG1YGR271C-A SMD1Q02260 146 aaPredicted RBP2.29□□□□□ -2.04
EFG1YGR271C-A RUB1Q03919 77 aa2.29□□□□□ -2.04
EFG1YGR271C-A NAT3Q06504 195 aa2.29□□□□□ -2.04
EFG1YGR271C-A YIR021W-AQ3E739 70 aa2.29□□□□□ -2.04
EFG1YGR271C-A AUS1Q08409 1394 aa2.28□□□□□ -2.04
EFG1YGR271C-A TIM9O74700 87 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms