RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W MSI1P13712 422 aa2.9□□□□□ -1.95
CAF130YGR134W TRX3P25372 127 aa2.9□□□□□ -1.95
CAF130YGR134W HSP30P25619 332 aa2.9□□□□□ -1.95
CAF130YGR134W SUA7P29055 345 aaPredicted RBP2.9□□□□□ -1.95
CAF130YGR134W YBR285WP38354 144 aa2.9□□□□□ -1.95
CAF130YGR134W CAT5P41735 233 aa2.9□□□□□ -1.95
CAF130YGR134W NIP7Q08962 181 aaKnown RBP2.9□□□□□ -1.95
CAF130YGR134W YPL247CQ12523 523 aa2.9□□□□□ -1.95
CAF130YGR134W PMD1P32634 1753 aa2.9□□□□□ -1.95
CAF130YGR134W SCO1P23833 295 aa2.89□□□□□ -1.95
CAF130YGR134W RFS1P38234 210 aaKnown RBP2.89□□□□□ -1.95
CAF130YGR134W RPF1P38805 295 aaKnown RBP2.89□□□□□ -1.95
CAF130YGR134W GPI14P47088 403 aaKnown RBP2.89□□□□□ -1.95
CAF130YGR134W ARO8P53090 500 aaKnown RBP2.89□□□□□ -1.95
CAF130YGR134W NRM1P53718 249 aa2.89□□□□□ -1.95
CAF130YGR134W APJ1P53940 528 aa2.89□□□□□ -1.95
CAF130YGR134W DIG2Q03373 323 aaKnown RBP2.89□□□□□ -1.95
CAF130YGR134W YMR317WQ04893 1140 aa2.89□□□□□ -1.95
CAF130YGR134W YFR032C-BQ8TGU2 87 aa2.89□□□□□ -1.95
CAF130YGR134W YBL010CP32788 280 aa2.89□□□□□ -1.95
CAF130YGR134W FIP1P45976 327 aa2.89□□□□□ -1.95
CAF130YGR134W ZRT3P34240 503 aa2.89□□□□□ -1.95
CAF130YGR134W FYV4P38783 130 aaPredicted RBP2.89□□□□□ -1.95
CAF130YGR134W RGI1P40043 161 aaPredicted RBP2.89□□□□□ -1.95
CAF130YGR134W YER186CP40101 306 aa2.89□□□□□ -1.95
CAF130YGR134W PRM5P40476 318 aa2.89□□□□□ -1.95
CAF130YGR134W UFD1P53044 361 aa2.89□□□□□ -1.95
CAF130YGR134W DAD3P69850 94 aa2.89□□□□□ -1.95
CAF130YGR134W YPL062WQ02781 134 aa2.89□□□□□ -1.95
CAF130YGR134W YPR011CQ12251 326 aa2.89□□□□□ -1.95
CAF130YGR134W REP2P03872 296 aa2.88□□□□□ -1.95
CAF130YGR134W STP22P25604 385 aa2.88□□□□□ -1.95
CAF130YGR134W BUB2P26448 306 aaPredicted RBP2.88□□□□□ -1.95
CAF130YGR134W CSE2P33308 149 aa2.88□□□□□ -1.95
CAF130YGR134W PTC1P35182 281 aa2.88□□□□□ -1.95
CAF130YGR134W YNK1P36010 153 aaKnown RBP2.88□□□□□ -1.95
CAF130YGR134W YHL026CP38740 315 aa2.88□□□□□ -1.95
CAF130YGR134W MTC6P38849 526 aa2.88□□□□□ -1.95
CAF130YGR134W HMF1P40037 129 aaKnown RBP2.88□□□□□ -1.95
CAF130YGR134W LSM3P57743 89 aaKnown RBP2.88□□□□□ -1.95
CAF130YGR134W YPL039WQ03080 316 aa2.88□□□□□ -1.95
CAF130YGR134W MCP1Q12106 302 aa2.88□□□□□ -1.95
CAF130YGR134W YPS3Q12303 508 aa2.88□□□□□ -1.95
CAF130YGR134W MBF1O14467 151 aaKnown RBP2.88□□□□□ -1.95
CAF130YGR134W Q0255P03881 472 aa2.88□□□□□ -1.95
CAF130YGR134W SNF4P12904 322 aa2.88□□□□□ -1.95
CAF130YGR134W UTP11P34247 250 aaPredicted RBP2.88□□□□□ -1.95
CAF130YGR134W YKR070WP36151 352 aaKnown RBP2.88□□□□□ -1.95
CAF130YGR134W SWD3P38123 315 aa2.88□□□□□ -1.95
CAF130YGR134W REE1P40893 198 aa2.88□□□□□ -1.95
CAF130YGR134W TDA4P47153 279 aa2.88□□□□□ -1.95
CAF130YGR134W PRP11Q07350 266 aaPredicted RBP2.88□□□□□ -1.95
CAF130YGR134W FYV7Q12247 151 aa2.88□□□□□ -1.95
CAF130YGR134W SGA1P08019 549 aa2.87□□□□□ -1.95
CAF130YGR134W MAG1P22134 296 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W RPL14AP36105 138 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W RPL14BP38754 138 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W GLR1P41921 483 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W SMD3P43321 101 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W PAC10P48363 199 aa2.87□□□□□ -1.95
CAF130YGR134W CRC1Q12289 327 aa2.87□□□□□ -1.95
CAF130YGR134W MOT1P32333 1867 aa2.87□□□□□ -1.95
CAF130YGR134W DLS1P40366 167 aa2.87□□□□□ -1.95
CAF130YGR134W YMR244WQ04018 355 aa2.87□□□□□ -1.95
CAF130YGR134W LPP1Q04396 274 aa2.87□□□□□ -1.95
CAF130YGR134W INM2Q05533 292 aa2.87□□□□□ -1.95
CAF130YGR134W AKR2Q12013 749 aa2.87□□□□□ -1.95
CAF130YGR134W RPL25P04456 142 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W RPL30P14120 105 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W ATP15P21306 62 aa2.87□□□□□ -1.95
CAF130YGR134W OCH1P31755 480 aa2.87□□□□□ -1.95
CAF130YGR134W YBR032WP38223 100 aa2.87□□□□□ -1.95
CAF130YGR134W SMX2P40204 77 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W YJR015WP47090 510 aa2.87□□□□□ -1.95
CAF130YGR134W COF1Q03048 143 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W YDR391CQ04170 232 aa2.87□□□□□ -1.95
CAF130YGR134W SMT3Q12306 101 aaKnown RBP2.87□□□□□ -1.95
CAF130YGR134W SMP1P38128 452 aa2.86□□□□□ -1.95
CAF130YGR134W YBR220CP38318 560 aa2.86□□□□□ -1.95
CAF130YGR134W PHO89P38361 574 aa2.86□□□□□ -1.95
CAF130YGR134W SPL2P38839 148 aa2.86□□□□□ -1.95
CAF130YGR134W YPL073CP40323 161 aa2.86□□□□□ -1.95
CAF130YGR134W YDR124WQ04608 324 aa2.86□□□□□ -1.95
CAF130YGR134W YCL001W-BQ96VH2 84 aa2.86□□□□□ -1.95
CAF130YGR134W YER189WP40104 122 aa2.86□□□□□ -1.95
CAF130YGR134W CRH1P53301 507 aa2.86□□□□□ -1.95
CAF130YGR134W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
CAF130YGR134W DGK1Q12382 290 aa2.86□□□□□ -1.95
CAF130YGR134W CBP6P07253 162 aaPredicted RBP2.86□□□□□ -1.95
CAF130YGR134W RPB3P16370 318 aaKnown RBP2.86□□□□□ -1.95
CAF130YGR134W URE2P23202 354 aaKnown RBP2.86□□□□□ -1.95
CAF130YGR134W URA10P30402 227 aa2.86□□□□□ -1.95
CAF130YGR134W SPT14P32363 452 aa2.86□□□□□ -1.95
CAF130YGR134W FLO5P38894 1075 aa2.86□□□□□ -1.95
CAF130YGR134W GAA1P39012 614 aa2.86□□□□□ -1.95
CAF130YGR134W GVP36P40531 326 aaKnown RBP2.86□□□□□ -1.95
CAF130YGR134W ERJ5P43613 295 aaPredicted RBP2.86□□□□□ -1.95
CAF130YGR134W MNN5P46982 586 aa2.86□□□□□ -1.95
CAF130YGR134W MDM34P53083 459 aa2.86□□□□□ -1.95
CAF130YGR134W YGR219WP53307 113 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms