RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W ARF2P19146 181 aaKnown RBP4.35□□□□□ -1.71
CDC4YFL009W SCO1P23833 295 aa4.35□□□□□ -1.71
CDC4YFL009W IML3P38265 245 aa4.35□□□□□ -1.71
CDC4YFL009W GGC1P38988 300 aa4.35□□□□□ -1.71
CDC4YFL009W PRE5P40302 234 aaKnown RBP4.35□□□□□ -1.71
CDC4YFL009W PRM5P40476 318 aa4.35□□□□□ -1.71
CDC4YFL009W XBP1P40489 647 aa4.35□□□□□ -1.71
CDC4YFL009W YPS6P40583 537 aa4.35□□□□□ -1.71
CDC4YFL009W RPN14P53196 417 aa4.35□□□□□ -1.71
CDC4YFL009W COX18P53239 316 aa4.35□□□□□ -1.71
CDC4YFL009W YNL184CP53876 108 aa4.35□□□□□ -1.71
CDC4YFL009W EOS1P53938 366 aa4.35□□□□□ -1.71
CDC4YFL009W DYN2Q02647 92 aa4.35□□□□□ -1.71
CDC4YFL009W YML053CQ04978 212 aa4.35□□□□□ -1.71
CDC4YFL009W YPR098CQ06089 161 aa4.35□□□□□ -1.71
CDC4YFL009W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
CDC4YFL009W FOL3Q12676 427 aaPredicted RBP4.35□□□□□ -1.71
CDC4YFL009W OLE1P21147 510 aaKnown RBP4.35□□□□□ -1.71
CDC4YFL009W MCK1P21965 375 aaKnown RBP4.35□□□□□ -1.71
CDC4YFL009W MNS1P32906 549 aa4.35□□□□□ -1.71
CDC4YFL009W KKQ8P36004 724 aa4.35□□□□□ -1.71
CDC4YFL009W ECM33P38248 429 aaKnown RBP4.35□□□□□ -1.71
CDC4YFL009W SPG5P42933 373 aa4.35□□□□□ -1.71
CDC4YFL009W ALG9P53868 555 aaKnown RBP4.35□□□□□ -1.71
CDC4YFL009W DUG3P53871 357 aa4.35□□□□□ -1.71
CDC4YFL009W GIS1Q03833 894 aa4.35□□□□□ -1.71
CDC4YFL009W YMR082CQ04276 118 aa4.35□□□□□ -1.71
CDC4YFL009W SNO4Q04902 237 aa4.35□□□□□ -1.71
CDC4YFL009W YPR174CQ06616 221 aaPredicted RBP4.35□□□□□ -1.71
CDC4YFL009W YOL073CQ08232 322 aa4.35□□□□□ -1.71
CDC4YFL009W HSP33Q08914 237 aaKnown RBP4.35□□□□□ -1.71
CDC4YFL009W HSP32Q08992 237 aa4.35□□□□□ -1.71
CDC4YFL009W YCR075W-AQ3E830 75 aa4.35□□□□□ -1.71
CDC4YFL009W SPT15P13393 240 aaKnown RBP4.34□□□□□ -1.71
CDC4YFL009W CBS1P14066 229 aa4.34□□□□□ -1.71
CDC4YFL009W MOB1P40484 314 aa4.34□□□□□ -1.71
CDC4YFL009W RPA43P46669 326 aa4.34□□□□□ -1.71
CDC4YFL009W YGL230CP53074 147 aa4.34□□□□□ -1.71
CDC4YFL009W YMR206WQ03695 313 aa4.34□□□□□ -1.71
CDC4YFL009W RPL7BQ12213 244 aaKnown RBP4.34□□□□□ -1.71
CDC4YFL009W POM34Q12445 299 aa4.34□□□□□ -1.71
CDC4YFL009W YLR358CO13565 187 aa4.34□□□□□ -1.72
CDC4YFL009W URA5P13298 226 aaKnown RBP4.34□□□□□ -1.72
CDC4YFL009W SGE1P33335 543 aa4.34□□□□□ -1.72
CDC4YFL009W JHD1P40034 492 aa4.34□□□□□ -1.72
CDC4YFL009W YFR020WP43600 232 aa4.34□□□□□ -1.72
CDC4YFL009W HIT1P46973 164 aa4.34□□□□□ -1.72
CDC4YFL009W MSY1P48527 492 aa4.34□□□□□ -1.72
CDC4YFL009W SGF73P53165 657 aa4.34□□□□□ -1.72
CDC4YFL009W LST7P53237 242 aa4.34□□□□□ -1.72
CDC4YFL009W SCW4P53334 386 aaKnown RBP4.34□□□□□ -1.72
CDC4YFL009W YML079WQ03629 201 aa4.34□□□□□ -1.72
CDC4YFL009W CCE1Q03702 353 aa4.34□□□□□ -1.72
CDC4YFL009W SNT309Q06091 175 aaPredicted RBP4.34□□□□□ -1.72
CDC4YFL009W FCY22Q12119 530 aa4.34□□□□□ -1.72
CDC4YFL009W YDL211CQ12121 372 aa4.34□□□□□ -1.72
CDC4YFL009W YLR363W-AQ3E747 85 aa4.34□□□□□ -1.72
CDC4YFL009W CCH1P50077 2039 aa4.34□□□□□ -1.72
CDC4YFL009W CDC36P06100 191 aaPredicted RBP4.33□□□□□ -1.72
CDC4YFL009W FEN2P25621 512 aaKnown RBP4.33□□□□□ -1.72
CDC4YFL009W PRE2P30656 287 aaKnown RBP4.33□□□□□ -1.72
CDC4YFL009W SLC1P33333 303 aa4.33□□□□□ -1.72
CDC4YFL009W UME6P39001 836 aa4.33□□□□□ -1.72
CDC4YFL009W PSD1P39006 500 aa4.33□□□□□ -1.72
CDC4YFL009W YNL092WP53934 400 aa4.33□□□□□ -1.72
CDC4YFL009W RKI1Q12189 258 aa4.33□□□□□ -1.72
CDC4YFL009W DET1Q99288 334 aaKnown RBP4.33□□□□□ -1.72
CDC4YFL009W CPR2P23285 205 aa4.33□□□□□ -1.72
CDC4YFL009W SPS18P32572 300 aa4.33□□□□□ -1.72
CDC4YFL009W BAT1P38891 393 aaKnown RBP4.33□□□□□ -1.72
CDC4YFL009W MSL1P40567 111 aaPredicted RBP4.33□□□□□ -1.72
CDC4YFL009W HAC1P41546 238 aa4.33□□□□□ -1.72
CDC4YFL009W YGL235WP53071 178 aa4.33□□□□□ -1.72
CDC4YFL009W ERG26P53199 349 aaKnown RBP4.33□□□□□ -1.72
CDC4YFL009W IZH1Q03419 316 aa4.33□□□□□ -1.72
CDC4YFL009W INP1Q03694 420 aa4.33□□□□□ -1.72
CDC4YFL009W SDH7Q04401 133 aa4.33□□□□□ -1.72
CDC4YFL009W ENB1Q08299 606 aa4.33□□□□□ -1.72
CDC4YFL009W YLR050CQ12155 161 aaKnown RBP4.33□□□□□ -1.72
CDC4YFL009W SME1Q12330 94 aaPredicted RBP4.33□□□□□ -1.72
CDC4YFL009W ATG40Q99325 256 aa4.33□□□□□ -1.72
CDC4YFL009W FMP49A0A023PZB3 126 aa4.32□□□□□ -1.72
CDC4YFL009W ADK2P26364 225 aa4.32□□□□□ -1.72
CDC4YFL009W TVP23P38962 199 aa4.32□□□□□ -1.72
CDC4YFL009W SEC72P39742 193 aaKnown RBP4.32□□□□□ -1.72
CDC4YFL009W YNR064CP53750 290 aa4.32□□□□□ -1.72
CDC4YFL009W ATG21Q02887 496 aa4.32□□□□□ -1.72
CDC4YFL009W SEI1Q06058 285 aa4.32□□□□□ -1.72
CDC4YFL009W MCP1Q12106 302 aa4.32□□□□□ -1.72
CDC4YFL009W RPS22BQ3E7Y3 130 aaKnown RBP4.32□□□□□ -1.72
CDC4YFL009W BTT1P40314 149 aaPredicted RBP4.32□□□□□ -1.72
CDC4YFL009W YJL028WP47062 111 aa4.32□□□□□ -1.72
CDC4YFL009W MIC27P50945 234 aa4.32□□□□□ -1.72
CDC4YFL009W GTO3Q04806 366 aa4.32□□□□□ -1.72
CDC4YFL009W ARR3Q06598 404 aa4.32□□□□□ -1.72
CDC4YFL009W PRP11Q07350 266 aaPredicted RBP4.32□□□□□ -1.72
CDC4YFL009W MCT1Q12283 360 aa4.32□□□□□ -1.72
CDC4YFL009W GEP5Q12393 293 aa4.32□□□□□ -1.72
CDC4YFL009W YIL102C-AQ2V2P5 75 aa4.32□□□□□ -1.72
CDC4YFL009W MSB2P32334 1306 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms