RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	DDI1	P40087	428 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	FMC1	P40491	155 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	AIM24	P47127	394 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	BNS1	P50084	137 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	MST27	P53176	234 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	RSM27	P53305	110 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	ACT1	P60010	375 aa	Known RBP	3.22	□□□□□ -1.89
UBC8	YEL012W	ECM18	Q04623	453 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	ATG40	Q99325	256 aa		3.22	□□□□□ -1.89
UBC8	YEL012W	PIS1	P06197	220 aa	Known RBP	3.21	□□□□□ -1.9
UBC8	YEL012W	PEX4	P29340	183 aa		3.21	□□□□□ -1.9
UBC8	YEL012W	FUN26	P31381	517 aa		3.21	□□□□□ -1.9
UBC8	YEL012W	ARO4	P32449	370 aa	Known RBP	3.21	□□□□□ -1.9
UBC8	YEL012W	YBL010C	P32788	280 aa		3.21	□□□□□ -1.9
UBC8	YEL012W	KEG1	P43614	200 aa		3.21	□□□□□ -1.9
UBC8	YEL012W	TIM11	P81449	96 aa	Predicted RBP	3.21	□□□□□ -1.9
UBC8	YEL012W	BUD25	P85052	153 aa		3.21	□□□□□ -1.9
UBC8	YEL012W	GRH1	Q04410	372 aa	Known RBP	3.21	□□□□□ -1.9
UBC8	YEL012W	SCW10	Q04951	389 aa		3.21	□□□□□ -1.9
UBC8	YEL012W	TFC7	Q12415	435 aa		3.21	□□□□□ -1.9
UBC8	YEL012W	STF1	P01098	86 aa		3.2	□□□□□ -1.9
UBC8	YEL012W	MRP1	P10662	321 aa	Known RBP	3.2	□□□□□ -1.9
UBC8	YEL012W	ERG2	P32352	222 aa		3.2	□□□□□ -1.9
UBC8	YEL012W	CPR5	P35176	225 aa		3.2	□□□□□ -1.9
UBC8	YEL012W	PRS4	P38063	326 aa	Predicted RBP	3.2	□□□□□ -1.9
UBC8	YEL012W	UMP1	P38293	148 aa		3.2	□□□□□ -1.9
UBC8	YEL012W	PRS2	P38620	318 aa	Known RBP	3.2	□□□□□ -1.9
UBC8	YEL012W	RRF1	P38771	230 aa		3.2	□□□□□ -1.9
UBC8	YEL012W	COG5	P53951	403 aa		3.2	□□□□□ -1.9
UBC8	YEL012W	FIT1	Q04433	528 aa		3.2	□□□□□ -1.9
UBC8	YEL012W	YGL041W-A	P0C5N3	154 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	STF2	P16965	84 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	IDP1	P21954	428 aa	Known RBP	3.19	□□□□□ -1.9
UBC8	YEL012W	BUD23	P25627	275 aa	Predicted RBP	3.19	□□□□□ -1.9
UBC8	YEL012W	VMA6	P32366	345 aa	Known RBP	3.19	□□□□□ -1.9
UBC8	YEL012W	SNC2	P33328	115 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	RCN1	P36054	211 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	PAU24	P38155	120 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	SOP4	P39543	234 aa	Predicted RBP	3.19	□□□□□ -1.9
UBC8	YEL012W	AVT6	P40074	448 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	MRPL49	P40858	161 aa	Predicted RBP	3.19	□□□□□ -1.9
UBC8	YEL012W	ATG18	P43601	500 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	YGL204C	P53089	101 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	TOS8	P53147	276 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	PAU12	P53343	120 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	RRP17	Q04031	235 aa	Predicted RBP	3.19	□□□□□ -1.9
UBC8	YEL012W	PEX30	Q06169	523 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	YPR1	Q12458	312 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	YOS1	Q3E834	85 aa		3.19	□□□□□ -1.9
UBC8	YEL012W	VPS63	O13549	108 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	TDH1	P00360	332 aa	Known RBP	3.18	□□□□□ -1.9
UBC8	YEL012W	MATALPHA1	P0CY06	175 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	HMLALPHA1	P0CY07	175 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	ERG24	P32462	438 aa	Known RBP	3.18	□□□□□ -1.9
UBC8	YEL012W	RAD23	P32628	398 aa	Known RBP	3.18	□□□□□ -1.9
UBC8	YEL012W	YKR045C	P36138	183 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	NRG2	P38082	220 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	ECM31	P38122	312 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	SSO2	P39926	295 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	YCH1	P42937	148 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	RPL9B	P51401	191 aa	Known RBP	3.18	□□□□□ -1.9
UBC8	YEL012W	LST7	P53237	242 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	YHP1	Q04116	353 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	ATG17	Q06410	417 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	NOC4	Q06512	552 aa	Predicted RBP	3.18	□□□□□ -1.9
UBC8	YEL012W	IRC23	Q08416	157 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	RBD2	Q12270	262 aa		3.18	□□□□□ -1.9
UBC8	YEL012W	PET18	P25362	215 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	OCH1	P31755	480 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	AST1	P35183	429 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	YBR285W	P38354	144 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	CCS1	P40202	249 aa	Known RBP	3.17	□□□□□ -1.9
UBC8	YEL012W	HAC1	P41546	238 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	YJL118W	P47022	219 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	HAM1	P47119	197 aa	Known RBP	3.17	□□□□□ -1.9
UBC8	YEL012W	CRH1	P53301	507 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	NEJ1	Q06148	342 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	PRM3	Q08931	133 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	YLR099W-A	Q3E798	87 aa		3.17	□□□□□ -1.9
UBC8	YEL012W	COX9	P07255	59 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	UTR5	P32630	166 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	SDH4	P37298	181 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	GNA1	P43577	159 aa	Predicted RBP	3.16	□□□□□ -1.9
UBC8	YEL012W	YFR057W	P43625	151 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	FMP33	P46998	180 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	DOC1	P53068	250 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	CAX4	P53223	239 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	FMP48	P53233	369 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	SRL4	Q03085	281 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	PBP4	Q07362	185 aa	Known RBP	3.16	□□□□□ -1.9
UBC8	YEL012W	YPD1	Q07688	167 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	YOL029C	Q08187	201 aa		3.16	□□□□□ -1.9
UBC8	YEL012W	YPL225W	Q08971	146 aa	Known RBP	3.16	□□□□□ -1.9
UBC8	YEL012W	TIR4	Q12218	487 aa	Predicted RBP	3.16	□□□□□ -1.9
UBC8	YEL012W	VMA5	P31412	392 aa	Known RBP	3.15	□□□□□ -1.91
UBC8	YEL012W	YPS1	P32329	569 aa		3.15	□□□□□ -1.91
UBC8	YEL012W	PAU2	P32612	120 aa		3.15	□□□□□ -1.91
UBC8	YEL012W	SFK1	P35735	353 aa		3.15	□□□□□ -1.91
UBC8	YEL012W	SRL3	P36167	246 aa		3.15	□□□□□ -1.91
UBC8	YEL012W	EGD2	P38879	174 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms