RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	COS10	P52924	374 aa		4.89	□□□□□ -1.63
CHL4	YDR254W	TPC1	P53257	314 aa		4.89	□□□□□ -1.63
CHL4	YDR254W	RSM27	P53305	110 aa		4.89	□□□□□ -1.63
CHL4	YDR254W	YNL234W	P53857	426 aa		4.89	□□□□□ -1.63
CHL4	YDR254W	ALG9	P53868	555 aa	Known RBP	4.89	□□□□□ -1.63
CHL4	YDR254W	YNL010W	P53981	241 aa	Known RBP	4.89	□□□□□ -1.63
CHL4	YDR254W	YPL245W	Q12179	454 aa	Known RBP	4.89	□□□□□ -1.63
CHL4	YDR254W	OCA6	Q12454	224 aa		4.89	□□□□□ -1.63
CHL4	YDR254W	KTI11	Q3E840	82 aa		4.89	□□□□□ -1.63
CHL4	YDR254W	YHR139C-A	O13536	103 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	YLR462W	O13556	202 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	PIS1	P06197	220 aa	Known RBP	4.88	□□□□□ -1.63
CHL4	YDR254W	CKS1	P20486	150 aa	Known RBP	4.88	□□□□□ -1.63
CHL4	YDR254W	SHB17	P36136	271 aa	Known RBP	4.88	□□□□□ -1.63
CHL4	YDR254W	YEL075C	P39972	122 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	YER189W	P40104	122 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	AVT7	P40501	490 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	YGL230C	P53074	147 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	FMP41	P53889	259 aa	Known RBP	4.88	□□□□□ -1.63
CHL4	YDR254W	YMR181C	Q03231	154 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	NUP170	P38181	1502 aa		4.88	□□□□□ -1.63
CHL4	YDR254W	Q0255	P03881	472 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	ANB1	P19211	157 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	PEX4	P29340	183 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	YBR063C	P38083	404 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	CAT5	P41735	233 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	STB1	P42845	420 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	RRT5	P43607	289 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	GPI2	P46961	280 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	YKR005C	Q02203	525 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	FMP42	Q04991	504 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	SNX3	Q08826	162 aa	Known RBP	4.87	□□□□□ -1.63
CHL4	YDR254W	SCP1	Q08873	200 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	YPS3	Q12303	508 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	NUP159	P40477	1460 aa		4.87	□□□□□ -1.63
CHL4	YDR254W	ETR1	P38071	380 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	YHR140W	P38842	239 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	TIM17	P39515	158 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	FIP1	P45976	327 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	TTI2	P47168	421 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	FMP48	P53233	369 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	AAH1	P53909	347 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	YNL033W	P53964	284 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	YNL019C	P53975	284 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	YLR412C-A	Q3E742	68 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	SPO14	P36126	1683 aa		4.86	□□□□□ -1.63
CHL4	YDR254W	RPL15A	P05748	204 aa	Known RBP	4.85	□□□□□ -1.63
CHL4	YDR254W	YKR070W	P36151	352 aa	Known RBP	4.85	□□□□□ -1.63
CHL4	YDR254W	GGC1	P38988	300 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	YIL024C	P40543	189 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	YGL088W	P53151	121 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	YGL082W	P53155	381 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	RPL15B	P54780	204 aa	Predicted RBP	4.85	□□□□□ -1.63
CHL4	YDR254W	TVP18	Q04767	167 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	YLR179C	Q06252	201 aa	Known RBP	4.85	□□□□□ -1.63
CHL4	YDR254W	NAT3	Q06504	195 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
CHL4	YDR254W	MIM1	Q08176	113 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	YOR292C	Q08743	309 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	GTT2	Q12390	233 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	DNF3	Q12674	1656 aa		4.85	□□□□□ -1.63
CHL4	YDR254W	RSF2	P46974	1380 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	RPS18A	P0CX55	146 aa	Known RBP	4.84	□□□□□ -1.63
CHL4	YDR254W	RPS18B	P0CX56	146 aa	Predicted RBP	4.84	□□□□□ -1.63
CHL4	YDR254W	CDC43	P18898	376 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	URA10	P30402	227 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	YBR090C	P38253	122 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	AST2	P39945	430 aa	Known RBP	4.84	□□□□□ -1.63
CHL4	YDR254W	EDC2	P40023	145 aa	Predicted RBP	4.84	□□□□□ -1.63
CHL4	YDR254W	PRM5	P40476	318 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	DIE2	P50076	525 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	RNH202	Q05635	350 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	HUT1	Q12520	339 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	YBL008W-A	Q3E821	79 aa		4.84	□□□□□ -1.63
CHL4	YDR254W	YBL081W	P38180	368 aa	Known RBP	4.83	□□□□□ -1.64
CHL4	YDR254W	YER181C	P40097	107 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	FIS1	P40515	155 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	NSE4	P43124	402 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	SBH1	P52870	82 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	YLR042C	Q07990	161 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	YPL278C	Q08990	100 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	TIR4	Q12218	487 aa	Predicted RBP	4.83	□□□□□ -1.64
CHL4	YDR254W	DGK1	Q12382	290 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	CSR2	Q12734	1121 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	YCR075W-A	Q3E830	75 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	YRF1-3	P0CX14	1859 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	YRF1-7	P0CX15	1859 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	YRF1-6	P53819	1859 aa		4.83	□□□□□ -1.64
CHL4	YDR254W	KRE5	P22023	1365 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	TY1B-DR3	Q99231	1755 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	REP2	P03872	296 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	YCR025C	P25352	136 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	SPT14	P32363	452 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	ECM31	P38122	312 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	SMP1	P38128	452 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	ELC1	Q03071	99 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	BSC1	Q12140	328 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	RDL1	Q12305	139 aa	Known RBP	4.82	□□□□□ -1.64
CHL4	YDR254W	IZH2	Q12442	317 aa		4.82	□□□□□ -1.64
CHL4	YDR254W	TDA8	Q6B2U8	126 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms