RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
KIN28YDL108W NDD1Q08887 554 aa3.82□□□□□ -1.8
KIN28YDL108W MCP1Q12106 302 aa3.82□□□□□ -1.8
KIN28YDL108W TY1B-BRQ12193 1756 aa3.81□□□□□ -1.8
KIN28YDL108W MMS1Q06211 1407 aa3.81□□□□□ -1.8
KIN28YDL108W HYP2P23301 157 aaKnown RBP3.81□□□□□ -1.8
KIN28YDL108W RPL16AP26784 199 aaKnown RBP3.81□□□□□ -1.8
KIN28YDL108W YBR063CP38083 404 aa3.81□□□□□ -1.8
KIN28YDL108W PET8P38921 284 aa3.81□□□□□ -1.8
KIN28YDL108W TIM17P39515 158 aa3.81□□□□□ -1.8
KIN28YDL108W PTI1P39927 425 aaPredicted RBP3.81□□□□□ -1.8
KIN28YDL108W RRT5P43607 289 aa3.81□□□□□ -1.8
KIN28YDL108W DIE2P50076 525 aa3.81□□□□□ -1.8
KIN28YDL108W TPC1P53257 314 aa3.81□□□□□ -1.8
KIN28YDL108W YNL033WP53964 284 aa3.81□□□□□ -1.8
KIN28YDL108W YNL019CP53975 284 aa3.81□□□□□ -1.8
KIN28YDL108W YGK3Q12222 375 aaPredicted RBP3.81□□□□□ -1.8
KIN28YDL108W YPS3Q12303 508 aa3.81□□□□□ -1.8
KIN28YDL108W IZH2Q12442 317 aa3.81□□□□□ -1.8
KIN28YDL108W PRM4Q12498 284 aa3.81□□□□□ -1.8
KIN28YDL108W HUT1Q12520 339 aa3.81□□□□□ -1.8
KIN28YDL108W YGL194C-AQ2V2P6 80 aa3.81□□□□□ -1.8
KIN28YDL108W YSP2Q06681 1438 aa3.8□□□□□ -1.8
KIN28YDL108W ADH1P00330 348 aaKnown RBP3.8□□□□□ -1.8
KIN28YDL108W SPT15P13393 240 aaKnown RBP3.8□□□□□ -1.8
KIN28YDL108W STF2P16965 84 aa3.8□□□□□ -1.8
KIN28YDL108W MRPL44P19956 98 aa3.8□□□□□ -1.8
KIN28YDL108W YHL049CP38722 271 aa3.8□□□□□ -1.8
KIN28YDL108W YHR140WP38842 239 aa3.8□□□□□ -1.8
KIN28YDL108W AST2P39945 430 aaKnown RBP3.8□□□□□ -1.8
KIN28YDL108W PAN6P40459 309 aa3.8□□□□□ -1.8
KIN28YDL108W YGL260WP53056 76 aa3.8□□□□□ -1.8
KIN28YDL108W RNH201P53942 307 aa3.8□□□□□ -1.8
KIN28YDL108W YNL046WP53956 172 aa3.8□□□□□ -1.8
KIN28YDL108W GAS3Q03655 524 aa3.8□□□□□ -1.8
KIN28YDL108W INP1Q03694 420 aa3.8□□□□□ -1.8
KIN28YDL108W GRH1Q04410 372 aaKnown RBP3.8□□□□□ -1.8
KIN28YDL108W SCW10Q04951 389 aa3.8□□□□□ -1.8
KIN28YDL108W RNH202Q05635 350 aa3.8□□□□□ -1.8
KIN28YDL108W COA4Q05809 96 aa3.8□□□□□ -1.8
KIN28YDL108W MSA1Q08471 629 aa3.8□□□□□ -1.8
KIN28YDL108W TIM18Q08749 192 aa3.8□□□□□ -1.8
KIN28YDL108W RPL15AP05748 204 aaKnown RBP3.79□□□□□ -1.8
KIN28YDL108W PRM5P40476 318 aa3.79□□□□□ -1.8
KIN28YDL108W TDA4P47153 279 aa3.79□□□□□ -1.8
KIN28YDL108W YGL193CP53097 103 aa3.79□□□□□ -1.8
KIN28YDL108W YGR164WP53291 111 aa3.79□□□□□ -1.8
KIN28YDL108W ERV29P53337 310 aa3.79□□□□□ -1.8
KIN28YDL108W PGA1P53896 198 aa3.79□□□□□ -1.8
KIN28YDL108W LOA1Q06508 300 aa3.79□□□□□ -1.8
KIN28YDL108W YOR186WQ08560 144 aa3.79□□□□□ -1.8
KIN28YDL108W PCL9Q12477 304 aa3.79□□□□□ -1.8
KIN28YDL108W ISD11Q6Q560 94 aa3.79□□□□□ -1.8
KIN28YDL108W XRN1P22147 1528 aaKnown RBP3.79□□□□□ -1.8
KIN28YDL108W MYO4P32492 1471 aa3.79□□□□□ -1.8
KIN28YDL108W Q0255P03881 472 aa3.78□□□□□ -1.8
KIN28YDL108W BGL2P15703 313 aaKnown RBP3.78□□□□□ -1.8
KIN28YDL108W TIP1P27654 210 aaPredicted RBP3.78□□□□□ -1.8
KIN28YDL108W ARO2P28777 376 aaKnown RBP3.78□□□□□ -1.8
KIN28YDL108W AVT5P38176 459 aa3.78□□□□□ -1.8
KIN28YDL108W ERV15P38312 142 aa3.78□□□□□ -1.8
KIN28YDL108W GNA1P43577 159 aaPredicted RBP3.78□□□□□ -1.8
KIN28YDL108W FIP1P45976 327 aa3.78□□□□□ -1.8
KIN28YDL108W MRH4P53166 561 aa3.78□□□□□ -1.8
KIN28YDL108W YNL010WP53981 241 aaKnown RBP3.78□□□□□ -1.8
KIN28YDL108W YDL180WQ12301 547 aa3.78□□□□□ -1.8
KIN28YDL108W YBL112CQ3E7Y4 105 aa3.78□□□□□ -1.8
KIN28YDL108W YRF1-3P0CX14 1859 aa3.77□□□□□ -1.81
KIN28YDL108W YRF1-7P0CX15 1859 aa3.77□□□□□ -1.81
KIN28YDL108W YRF1-6P53819 1859 aa3.77□□□□□ -1.81
KIN28YDL108W MAG1P22134 296 aaKnown RBP3.77□□□□□ -1.81
KIN28YDL108W YCR022CP25620 114 aa3.77□□□□□ -1.81
KIN28YDL108W AGA1P32323 725 aa3.77□□□□□ -1.81
KIN28YDL108W TRS20P38334 175 aa3.77□□□□□ -1.81
KIN28YDL108W GGC1P38988 300 aa3.77□□□□□ -1.81
KIN28YDL108W RPR2P40571 144 aa3.77□□□□□ -1.81
KIN28YDL108W YJL213WP40896 331 aa3.77□□□□□ -1.81
KIN28YDL108W FMP48P53233 369 aa3.77□□□□□ -1.81
KIN28YDL108W PPT2Q12036 173 aa3.77□□□□□ -1.81
KIN28YDL108W AYT1Q12226 474 aa3.77□□□□□ -1.81
KIN28YDL108W YCR024C-BQ3E7Z8 88 aa3.77□□□□□ -1.81
KIN28YDL108W YPL229WQ99395 206 aa3.77□□□□□ -1.81
KIN28YDL108W HTL1Q9URQ5 78 aa3.77□□□□□ -1.81
KIN28YDL108W PDR11P40550 1411 aa3.77□□□□□ -1.81
KIN28YDL108W RPS14AP06367 137 aaKnown RBP3.76□□□□□ -1.81
KIN28YDL108W RPL23AP0CX41 137 aaKnown RBP3.76□□□□□ -1.81
KIN28YDL108W RPL23BP0CX42 137 aaKnown RBP3.76□□□□□ -1.81
KIN28YDL108W ATR1P13090 542 aa3.76□□□□□ -1.81
KIN28YDL108W HAP3P13434 144 aa3.76□□□□□ -1.81
KIN28YDL108W COX10P21592 462 aa3.76□□□□□ -1.81
KIN28YDL108W SDH4P37298 181 aa3.76□□□□□ -1.81
KIN28YDL108W RPL14BP38754 138 aaKnown RBP3.76□□□□□ -1.81
KIN28YDL108W RPB11P38902 120 aa3.76□□□□□ -1.81
KIN28YDL108W RPS14BP39516 138 aaKnown RBP3.76□□□□□ -1.81
KIN28YDL108W SPC25P40014 221 aa3.76□□□□□ -1.81
KIN28YDL108W CAT5P41735 233 aa3.76□□□□□ -1.81
KIN28YDL108W GON7P46984 123 aa3.76□□□□□ -1.81
KIN28YDL108W ARP3P47117 449 aaKnown RBP3.76□□□□□ -1.81
KIN28YDL108W WSC2P53832 503 aa3.76□□□□□ -1.81
KIN28YDL108W BUD25P85052 153 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms