RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W ATG5Q12380 294 aa5.36□□□□□ -1.55
LDB16YCL005W AGC1Q12482 902 aa5.36□□□□□ -1.55
LDB16YCL005W RPL21BQ12672 160 aaKnown RBP5.36□□□□□ -1.55
LDB16YCL005W YHR213W-AQ8TGT4 77 aa5.36□□□□□ -1.55
LDB16YCL005W MRS4P23500 304 aa5.35□□□□□ -1.55
LDB16YCL005W ROX3P25046 220 aa5.35□□□□□ -1.55
LDB16YCL005W DAL80P26343 269 aa5.35□□□□□ -1.55
LDB16YCL005W LDS1P31379 325 aa5.35□□□□□ -1.55
LDB16YCL005W CBT1P36038 271 aaPredicted RBP5.35□□□□□ -1.55
LDB16YCL005W YHR138CP38841 114 aaPredicted RBP5.35□□□□□ -1.55
LDB16YCL005W YER121WP40076 114 aa5.35□□□□□ -1.55
LDB16YCL005W MCM22P47167 239 aa5.35□□□□□ -1.55
LDB16YCL005W TTI2P47168 421 aa5.35□□□□□ -1.55
LDB16YCL005W GEP7P53171 287 aa5.35□□□□□ -1.55
LDB16YCL005W WSC2P53832 503 aa5.35□□□□□ -1.55
LDB16YCL005W FMP41P53889 259 aaKnown RBP5.35□□□□□ -1.55
LDB16YCL005W ERV25P54837 211 aaKnown RBP5.35□□□□□ -1.55
LDB16YCL005W TIM11P81449 96 aaPredicted RBP5.35□□□□□ -1.55
LDB16YCL005W YML108WQ03759 105 aa5.35□□□□□ -1.55
LDB16YCL005W LPP1Q04396 274 aa5.35□□□□□ -1.55
LDB16YCL005W YTH1Q06102 208 aaPredicted RBP5.35□□□□□ -1.55
LDB16YCL005W POM34Q12445 299 aa5.35□□□□□ -1.55
LDB16YCL005W YMR31P19955 123 aa5.34□□□□□ -1.55
LDB16YCL005W MSK1P32048 576 aa5.34□□□□□ -1.55
LDB16YCL005W ECM14P38836 430 aa5.34□□□□□ -1.55
LDB16YCL005W GET2P40056 285 aa5.34□□□□□ -1.55
LDB16YCL005W PIR5P46999 287 aa5.34□□□□□ -1.55
LDB16YCL005W ERG25P53045 309 aa5.34□□□□□ -1.55
LDB16YCL005W YGL262WP53054 175 aa5.34□□□□□ -1.55
LDB16YCL005W YAP1802P53309 568 aa5.34□□□□□ -1.55
LDB16YCL005W YNR066CP53752 436 aa5.34□□□□□ -1.55
LDB16YCL005W STP4Q07351 490 aa5.34□□□□□ -1.55
LDB16YCL005W YPL264CQ08980 353 aa5.34□□□□□ -1.55
LDB16YCL005W YBR255C-AQ3E776 120 aa5.34□□□□□ -1.55
LDB16YCL005W BOL1Q3E793 110 aa5.34□□□□□ -1.55
LDB16YCL005W VMA9Q3E7B6 73 aa5.34□□□□□ -1.55
LDB16YCL005W COA2Q3E823 68 aa5.34□□□□□ -1.55
LDB16YCL005W SPS100P13130 326 aa5.33□□□□□ -1.56
LDB16YCL005W ATP10P18496 279 aa5.33□□□□□ -1.56
LDB16YCL005W YBR292CP38357 123 aa5.33□□□□□ -1.56
LDB16YCL005W CUE1P38428 203 aa5.33□□□□□ -1.56
LDB16YCL005W RTC3P38804 111 aaPredicted RBP5.33□□□□□ -1.56
LDB16YCL005W SPC25P40014 221 aa5.33□□□□□ -1.56
LDB16YCL005W SGN1P40561 250 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
LDB16YCL005W QRI1P43123 477 aaKnown RBP5.33□□□□□ -1.56
LDB16YCL005W YJR056CP47115 236 aa5.33□□□□□ -1.56
LDB16YCL005W PDR17P53844 350 aa5.33□□□□□ -1.56
LDB16YCL005W SDO1Q07953 250 aaKnown RBP5.33□□□□□ -1.56
LDB16YCL005W YMR105W-AQ8TGS8 64 aa5.33□□□□□ -1.56
LDB16YCL005W BPH1P25356 2167 aa5.33□□□□□ -1.56
LDB16YCL005W VPS63O13549 108 aa5.32□□□□□ -1.56
LDB16YCL005W RPL9AP05738 191 aaKnown RBP5.32□□□□□ -1.56
LDB16YCL005W TCA17P32613 152 aa5.32□□□□□ -1.56
LDB16YCL005W MTR2P34232 184 aaKnown RBP5.32□□□□□ -1.56
LDB16YCL005W UPS2P35200 230 aa5.32□□□□□ -1.56
LDB16YCL005W SOR1P35497 357 aaKnown RBP5.32□□□□□ -1.56
LDB16YCL005W ARP3P47117 449 aaKnown RBP5.32□□□□□ -1.56
LDB16YCL005W PEF1P53238 335 aa5.32□□□□□ -1.56
LDB16YCL005W ADD37Q03233 198 aa5.32□□□□□ -1.56
LDB16YCL005W FSH2Q05015 223 aa5.32□□□□□ -1.56
LDB16YCL005W YLR179CQ06252 201 aaKnown RBP5.32□□□□□ -1.56
LDB16YCL005W YPD1Q07688 167 aa5.32□□□□□ -1.56
LDB16YCL005W SOR2Q07786 357 aa5.32□□□□□ -1.56
LDB16YCL005W PML1Q07930 204 aaPredicted RBP5.32□□□□□ -1.56
LDB16YCL005W YDR157WA0A023PZE8 133 aa5.31□□□□□ -1.56
LDB16YCL005W CNB1P25296 175 aa5.31□□□□□ -1.56
LDB16YCL005W RIB5P38145 238 aa5.31□□□□□ -1.56
LDB16YCL005W CTR2P38865 189 aa5.31□□□□□ -1.56
LDB16YCL005W RPL9BP51401 191 aaKnown RBP5.31□□□□□ -1.56
LDB16YCL005W YGR050CP53231 118 aa5.31□□□□□ -1.56
LDB16YCL005W SMM1P53720 384 aaKnown RBP5.31□□□□□ -1.56
LDB16YCL005W YNR064CP53750 290 aa5.31□□□□□ -1.56
LDB16YCL005W TMA23Q03525 211 aa5.31□□□□□ -1.56
LDB16YCL005W YDL242WQ07746 117 aa5.31□□□□□ -1.56
LDB16YCL005W YOR015WQ12169 119 aa5.31□□□□□ -1.56
LDB16YCL005W YOR029WQ12243 111 aa5.31□□□□□ -1.56
LDB16YCL005W PRR2Q12310 699 aa5.31□□□□□ -1.56
LDB16YCL005W COX19Q3E731 98 aa5.31□□□□□ -1.56
LDB16YCL005W PCC1Q3E833 88 aa5.31□□□□□ -1.56
LDB16YCL005W YOS1Q3E834 85 aa5.31□□□□□ -1.56
LDB16YCL005W URA5P13298 226 aaKnown RBP5.3□□□□□ -1.56
LDB16YCL005W YCR025CP25352 136 aa5.3□□□□□ -1.56
LDB16YCL005W SIP1P32578 815 aa5.3□□□□□ -1.56
LDB16YCL005W YKL187CP34231 750 aa5.3□□□□□ -1.56
LDB16YCL005W YIL024CP40543 189 aa5.3□□□□□ -1.56
LDB16YCL005W SBH2P52871 88 aa5.3□□□□□ -1.56
LDB16YCL005W YNL092WP53934 400 aa5.3□□□□□ -1.56
LDB16YCL005W DCS1Q06151 350 aa5.3□□□□□ -1.56
LDB16YCL005W YDL009CQ12210 107 aa5.3□□□□□ -1.56
LDB16YCL005W YGL258W-AQ3E740 77 aa5.3□□□□□ -1.56
LDB16YCL005W TDH1P00360 332 aaKnown RBP5.29□□□□□ -1.56
LDB16YCL005W APA2P22108 325 aa5.29□□□□□ -1.56
LDB16YCL005W FEN2P25621 512 aaKnown RBP5.29□□□□□ -1.56
LDB16YCL005W SPS18P32572 300 aa5.29□□□□□ -1.56
LDB16YCL005W POG1P40473 351 aa5.29□□□□□ -1.56
LDB16YCL005W YJL118WP47022 219 aa5.29□□□□□ -1.56
LDB16YCL005W TIM10P87108 93 aa5.29□□□□□ -1.56
LDB16YCL005W IRC25Q07951 179 aa5.29□□□□□ -1.56
LDB16YCL005W YCL048W-AQ2V2Q2 79 aa5.29□□□□□ -1.56
LDB16YCL005W TRA1P38811 3744 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 40.2 ms