RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	DED1	P06634	604 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	URA5	P13298	226 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	YMC1	P32331	307 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	KKQ8	P36004	724 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	UMP1	P38293	148 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	ATX1	P38636	73 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	TEM1	P38987	245 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	PHS1	P40857	217 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	HSV2	P50079	448 aa	Predicted RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	EMC4	P53073	190 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	WSC2	P53832	503 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	RHO5	P53879	331 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	PER33	Q12144	273 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	FCY1	Q12178	158 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YLR363W-A	Q3E747	85 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	Q0010	Q9ZZX9	128 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	HVG1	P0CE11	249 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	RPL12A	P0CX53	165 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	RPL12B	P0CX54	165 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	PHO85	P17157	305 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	MRPL20	P22354	195 aa	Predicted RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	ZRT1	P32804	376 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	PAU16	P35994	123 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YGP1	P38616	354 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	SDP1	P40479	209 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YIP5	P53108	310 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	PGA1	P53896	198 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	FCF1	Q05498	189 aa	Predicted RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	YER190C-B	P0CX94	160 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YEL077W-A	P0CX95	160 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YGR296C-B	P0CX96	160 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YPL283W-B	P0CX97	160 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YPR204C-A	P0CX98	160 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	GAR1	P28007	205 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	YJU3	P28321	313 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	MAC1	P35192	417 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	MCR1	P36060	302 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	SRP14	P38985	146 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	DLS1	P40366	167 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YIL059C	P40520	121 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	CIN2	P46670	268 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	BNA2	P47125	453 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	RPL21A	Q02753	160 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	MRPL1	Q04599	285 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YMR310C	Q04867	317 aa	Predicted RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	YPR098C	Q06089	161 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	JID1	Q12350	301 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	PCL9	Q12477	304 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	RPL21B	Q12672	160 aa	Known RBP	4.05	□□□□□ -1.76
VHC1	YBR235W	YDL007C-A	Q2V2Q0	85 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	ODC2	Q99297	307 aa		4.05	□□□□□ -1.76
VHC1	YBR235W	YBR121C-A	P0C5L4	52 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	SEC11	P15367	167 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	CPT1	P17898	393 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	OPI10	Q08202	246 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	DAP1	Q12091	152 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	GAS1	P22146	559 aa	Known RBP	4.04	□□□□□ -1.76
VHC1	YBR235W	OST2	P46964	130 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	YJL118W	P47022	219 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	PAU12	P53343	120 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	YMR166C	Q03829	368 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	BLS1	Q06071	122 aa		4.04	□□□□□ -1.76
VHC1	YBR235W	MRPL51	Q06090	140 aa	Predicted RBP	4.04	□□□□□ -1.76
VHC1	YBR235W	SPC29	P33419	253 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YKR070W	P36151	352 aa	Known RBP	4.03	□□□□□ -1.76
VHC1	YBR235W	MRP21	P38175	177 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	XBP1	P40489	647 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YGL230C	P53074	147 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	IGO1	P53897	168 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	RPL34A	P87262	121 aa	Predicted RBP	4.03	□□□□□ -1.76
VHC1	YBR235W	FSH2	Q05015	223 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YOR376W	Q08900	122 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YPL162C	Q12042	273 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YRF1-3	P0CX14	1859 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YRF1-7	P0CX15	1859 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YRF1-6	P53819	1859 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YAR066W	P0CX18	203 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YHR214W	P0CX19	203 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	POX1	P13711	748 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	TRX3	P25372	127 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	PAU2	P32612	120 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	MID1	P41821	548 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	YFR020W	P43600	232 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	PRY1	P47032	299 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	MKK2	P32491	506 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	SWD2	P36104	329 aa	Predicted RBP	4.03	□□□□□ -1.76
VHC1	YBR235W	PHO88	P38264	188 aa	Predicted RBP	4.03	□□□□□ -1.76
VHC1	YBR235W	TAZ1	Q06510	381 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	SWT1	Q12104	458 aa		4.03	□□□□□ -1.76
VHC1	YBR235W	VPS63	O13549	108 aa		4.02	□□□□□ -1.77
VHC1	YBR235W	COX10	P21592	462 aa		4.02	□□□□□ -1.77
VHC1	YBR235W	RNQ1	P25367	405 aa		4.02	□□□□□ -1.77
VHC1	YBR235W	GRX1	P25373	110 aa	Known RBP	4.02	□□□□□ -1.77
VHC1	YBR235W	PAM17	P36147	197 aa		4.02	□□□□□ -1.77
VHC1	YBR235W	RPS20	P38701	121 aa	Known RBP	4.02	□□□□□ -1.77
VHC1	YBR235W	YMR074C	Q04773	145 aa		4.02	□□□□□ -1.77
VHC1	YBR235W	YRA1	Q12159	226 aa	Known RBP	4.02	□□□□□ -1.77
VHC1	YBR235W	SPO13	P23624	291 aa		4.02	□□□□□ -1.77
VHC1	YBR235W	SCO1	P23833	295 aa		4.02	□□□□□ -1.77
VHC1	YBR235W	RFA3	P26755	122 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms