RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C ATF1P40353 525 aa4.73□□□□□ -1.65
RFA1YAR007C HSV2P50079 448 aaPredicted RBP4.73□□□□□ -1.65
RFA1YAR007C TAF4P50105 388 aa4.73□□□□□ -1.65
RFA1YAR007C PDR17P53844 350 aa4.73□□□□□ -1.65
RFA1YAR007C YPL077CQ02831 240 aa4.73□□□□□ -1.65
RFA1YAR007C MIM1Q08176 113 aa4.73□□□□□ -1.65
RFA1YAR007C YPL264CQ08980 353 aa4.73□□□□□ -1.65
RFA1YAR007C MCP1Q12106 302 aa4.73□□□□□ -1.65
RFA1YAR007C LEU9Q12166 604 aaKnown RBP4.73□□□□□ -1.65
RFA1YAR007C MDM35O60200 86 aa4.73□□□□□ -1.65
RFA1YAR007C GAL7P08431 366 aa4.73□□□□□ -1.65
RFA1YAR007C CPR1P14832 162 aaKnown RBP4.73□□□□□ -1.65
RFA1YAR007C OCH1P31755 480 aa4.73□□□□□ -1.65
RFA1YAR007C PRE5P40302 234 aaKnown RBP4.73□□□□□ -1.65
RFA1YAR007C YIL169CP40442 995 aa4.73□□□□□ -1.65
RFA1YAR007C DIG2Q03373 323 aaKnown RBP4.73□□□□□ -1.65
RFA1YAR007C YAP6Q03935 383 aa4.73□□□□□ -1.65
RFA1YAR007C GIM5Q04493 163 aa4.73□□□□□ -1.65
RFA1YAR007C COQ11Q05892 277 aa4.73□□□□□ -1.65
RFA1YAR007C RDL1Q12305 139 aaKnown RBP4.73□□□□□ -1.65
RFA1YAR007C HUG1Q6Q5K6 68 aa4.73□□□□□ -1.65
RFA1YAR007C YLR365WQ7LIF2 110 aa4.73□□□□□ -1.65
RFA1YAR007C ADE8P04161 214 aa4.72□□□□□ -1.65
RFA1YAR007C SPT15P13393 240 aaKnown RBP4.72□□□□□ -1.65
RFA1YAR007C QDR3P38227 689 aa4.72□□□□□ -1.65
RFA1YAR007C WSC4P38739 605 aa4.72□□□□□ -1.65
RFA1YAR007C TEM1P38987 245 aa4.72□□□□□ -1.65
RFA1YAR007C CRH1P53301 507 aa4.72□□□□□ -1.65
RFA1YAR007C TRI1Q05024 226 aa4.72□□□□□ -1.65
RFA1YAR007C ARR3Q06598 404 aa4.72□□□□□ -1.65
RFA1YAR007C USV1Q12132 391 aa4.72□□□□□ -1.65
RFA1YAR007C HUT1Q12520 339 aa4.72□□□□□ -1.65
RFA1YAR007C YCR024C-BQ3E7Z8 88 aa4.72□□□□□ -1.65
RFA1YAR007C MES1P00958 751 aaKnown RBP4.71□□□□□ -1.66
RFA1YAR007C NOP1P15646 327 aaKnown RBP4.71□□□□□ -1.66
RFA1YAR007C IMG1P25626 169 aa4.71□□□□□ -1.66
RFA1YAR007C HOG1P32485 435 aa4.71□□□□□ -1.66
RFA1YAR007C MTR2P34232 184 aaKnown RBP4.71□□□□□ -1.66
RFA1YAR007C PAM17P36147 197 aa4.71□□□□□ -1.66
RFA1YAR007C YGR269WP40326 108 aa4.71□□□□□ -1.66
RFA1YAR007C CUP9P41817 306 aa4.71□□□□□ -1.66
RFA1YAR007C ZIM17P42844 174 aa4.71□□□□□ -1.66
RFA1YAR007C RPA43P46669 326 aa4.71□□□□□ -1.66
RFA1YAR007C GPI2P46961 280 aa4.71□□□□□ -1.66
RFA1YAR007C YMR007WQ03675 126 aa4.71□□□□□ -1.66
RFA1YAR007C YMR166CQ03829 368 aa4.71□□□□□ -1.66
RFA1YAR007C ATG39Q06159 398 aa4.71□□□□□ -1.66
RFA1YAR007C LDS2Q08218 356 aa4.71□□□□□ -1.66
RFA1YAR007C YOR105WQ08504 108 aa4.71□□□□□ -1.66
RFA1YAR007C MBF1O14467 151 aaKnown RBP4.71□□□□□ -1.66
RFA1YAR007C MRP10O75012 95 aa4.71□□□□□ -1.66
RFA1YAR007C RPS22AP0C0W1 130 aaKnown RBP4.71□□□□□ -1.66
RFA1YAR007C QCR9P22289 66 aa4.71□□□□□ -1.66
RFA1YAR007C YND1P40009 630 aa4.71□□□□□ -1.66
RFA1YAR007C ABM1P47146 123 aa4.71□□□□□ -1.66
RFA1YAR007C FRE8Q12209 686 aa4.71□□□□□ -1.66
RFA1YAR007C YBR255C-AQ3E776 120 aa4.71□□□□□ -1.66
RFA1YAR007C YPR108W-AQ3E7B3 70 aa4.71□□□□□ -1.66
RFA1YAR007C SCS22Q6Q595 175 aa4.71□□□□□ -1.66
RFA1YAR007C RPI1P23250 407 aaKnown RBP4.7□□□□□ -1.66
RFA1YAR007C RPB7P34087 171 aa4.7□□□□□ -1.66
RFA1YAR007C YBL059WP34224 193 aa4.7□□□□□ -1.66
RFA1YAR007C SRP14P38985 146 aa4.7□□□□□ -1.66
RFA1YAR007C LYS1P38998 373 aaRIP-Chip data4.7□□□□□ -1.66not detected
RFA1YAR007C YDR286CQ05530 114 aa4.7□□□□□ -1.66
RFA1YAR007C CNL1Q06333 122 aa4.7□□□□□ -1.66
RFA1YAR007C LOA1Q06508 300 aa4.7□□□□□ -1.66
RFA1YAR007C YPR174CQ06616 221 aaPredicted RBP4.7□□□□□ -1.66
RFA1YAR007C PAM18Q07914 168 aa4.7□□□□□ -1.66
RFA1YAR007C CSM4Q08955 156 aa4.7□□□□□ -1.66
RFA1YAR007C YPL162CQ12042 273 aa4.7□□□□□ -1.66
RFA1YAR007C SMT3Q12306 101 aaKnown RBP4.7□□□□□ -1.66
RFA1YAR007C SLO1Q3E784 85 aa4.7□□□□□ -1.66
RFA1YAR007C SEC11P15367 167 aa4.69□□□□□ -1.66
RFA1YAR007C ARO2P28777 376 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C LSM2P38203 95 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C UME6P39001 836 aa4.69□□□□□ -1.66
RFA1YAR007C YIL163CP40448 117 aa4.69□□□□□ -1.66
RFA1YAR007C HAC1P41546 238 aa4.69□□□□□ -1.66
RFA1YAR007C CTK2P46962 323 aa4.69□□□□□ -1.66
RFA1YAR007C XPT1P47165 209 aa4.69□□□□□ -1.66
RFA1YAR007C YGL230CP53074 147 aa4.69□□□□□ -1.66
RFA1YAR007C SSU72P53538 206 aaPredicted RBP4.69□□□□□ -1.66
RFA1YAR007C ADH6Q04894 360 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C IRC19Q07843 230 aa4.69□□□□□ -1.66
RFA1YAR007C YLR050CQ12155 161 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C SOD1P00445 154 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C YCR007CP25354 239 aa4.69□□□□□ -1.66
RFA1YAR007C YBR184WP38299 523 aa4.69□□□□□ -1.66
RFA1YAR007C MED6P38782 295 aa4.69□□□□□ -1.66
RFA1YAR007C BAT1P38891 393 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C YGR017WP53210 297 aa4.69□□□□□ -1.66
RFA1YAR007C YDR102CQ03864 110 aa4.69□□□□□ -1.66
RFA1YAR007C SEI1Q06058 285 aa4.69□□□□□ -1.66
RFA1YAR007C YPR147CQ06522 304 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C ALG6Q12001 544 aaKnown RBP4.69□□□□□ -1.66
RFA1YAR007C NAG1Q8TGN9 163 aa4.69□□□□□ -1.66
RFA1YAR007C PAI3P01094 68 aa4.68□□□□□ -1.66
RFA1YAR007C CDC36P06100 191 aaPredicted RBP4.68□□□□□ -1.66
RFA1YAR007C CUP2P15315 225 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 73.6 ms